YALI0E12133g

Overview

Description similar to uniprot|P00445 Saccharomyces cerevisiae YJR104c SOD1 copper-zinc superoxide dismutase
Locus type CDS
Locus tag YALI0E12133g

Location

Species Yarrowia lipolytica Positions 1473987..1474802
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 816 (nuc.)
Previous locus YALI0E12111g Next locus YALI0E12155g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E12133g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E12133gYALI0E12133g_mRNA-001YALI0E12133g_CDS-001

Nucleotide sequence

 

>YALI0E12133g
ATGGTCAAGGCTGGTGAGTACGAGAGCAAGGCCCGGAATCGGGCACATTGAGCGGCCAGC
GGGTCAATTGAAGGCCGCTCGACCGGTCCACACCCACAGGTTGGCCGCTACGTTGACTTC
GACAACCGTCTGGAAGGTGGCGGAACGTTGCGCCGTGTGAGGTGGCAGGTGACTCAGAAG
TTGCTCATTGTTTGTTGAGATCAGACCCCACAAGCACAATTGCATTTTAGGAGGGAATTG
AGAGCCCTACCTCACGGAATAGTCCATGTCGTTGTTCGCCACTTGCCCACACTGCACATT
CTAACCCAGTCGCTGTTCTTCGAGGAGATTCCAAGGTCTCCGGTACTGTCACTTTCGAGC
AGGACTCTGAGTCCGGCCCCGTCACTGTCACCTACGACATCAAGGGCAACGATCCCAACG
CTGAGCGAGGATTCCACGTCCACGAGTTTGGTGACAACACCAACGGCTGCACTTCTGCCG
GCCCCCACTTCAACCCCTTCAAGAAGAACCACGGTGGTCCCACCGACTCTGAGCGACACG
TTGGTGACCTCGGAAACGTCAAGACTGACTCTGAGGGTGTTGCCAAGGGTGTTCTCAAGG
ACTCTCTTCTCAAGCTGACTGGTGACAACTCCATTGTTGGCCGAACCGTCGTTATCCACG
GTGGTGAGGACGATCTTGGAAAGGGTGGCCATGCCGACTCTCTCAAGACCGGAAACGCTG
GCCCTCGACCCGCCTGCGGTGTCATTGGTCTTACCGCCTAAGTTATGTTTAGTATTCCTG
AGATACTCTATGAATGAATGACTTGTTATATGTGAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E12133g_CDS-001

Protein length: 155 aa.
Product: Cytosolic copper-zinc superoxide dismutase, putative

>YALI0E12133g_CDS-001 MVKAVAVLRGDSKVSGTVTFEQDSESGPVTVTYDIKGNDPNAERGFHVHEFGDNTNGCTS
AGPHFNPFKKNHGGPTDSERHVGDLGNVKTDSEGVAKGVLKDSLLKLTGDNSIVGRTVVI
HGGEDDLGKGGHADSLKTGNAGPRPACGVIGLTA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG