YALI0E12111g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0E12111g

Location

Species Yarrowia lipolytica Positions 1471318..1472381
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1064 (nuc.)
Previous locus YALI0E12089g Next locus YALI0E12133g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E12111g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E12111gYALI0E12111g_mRNA-001YALI0E12111g_CDS-001

Nucleotide sequence

 

>YALI0E12111g
ATGGCCTTTCTACGATTTACCGGTCGCCAGAGCCCAGCCCGCCACGAGGACCACAAGTAC
TTTGTGTCCACCCGTCCCGGACGACCCCAGTCGGTGCTGTCCGACGAGACCCTGGTTTCC
AGGACCATCGTCAGCGCCGACAAGGTTGCCGGACGGCGGCGTAAGTTTGGTGATAAGCTG
AGGAGTCTGTTGAGAGGGGACAGGGACAAGGCCGACAAGGCCCCAGTCGCAAGCAAGAAG
TCTTCAATGACCTTGCCCAAGACCAGCCCAGTGTCGTCTTGTGTCCCCAAGAAGGCGGCG
GCCGTGGCTGCTGCTGCTTCCAAACCGGCAGCATCCACTAGGCCTGCCTCCCCCTCTCCC
TCCCCGGCTTGCTCCGACGGGTTCATGTTCTGGCACGACCCTTCAGACAACCTGACCCCC
GTGACCTCCCACGAGTCGTTTGGCTCGGTCGACCTGTCGATCGAAGACACCGACGTGCTC
GAGCAGCTCGCAGAGGTCCCCCGATGCTCCAACCGCATCTCCAAATCAACCTCCCAGTCC
TCCATGGCGTCCCAGCTCACTATCCCGAACTCAGTCAGCTGCACGTCTCAGCTCAGCGCT
ATTGCCGTTTCTGCGTTCTCCGACTCCGGTTCCGACTCGGGCATGTCCGATTCGGCCACT
TGTTTCGGTGCAGAGGAGCTGGACTTCGACGTCAAGGATGCCTACAACCTCGGAGACTGG
GGTCTTCCCCGTGGTCTCACCGATGGCTACTCGGACAGCGAGGACGAGGACGACCTGCTC
GACGACATTGTCGACTCGGTTGAATCCGTCTACGCCCCTGTCTCCGCCAAAACCGTTGGA
TACACCTTCTGCCTTGCCATTTGGGGCAAGCCTGAGGTGCGATCCAAGTTCCTTGCTCTC
CAGGACCGAGTTAACAAAAACAAGGAAAAGGAGATGCCCGTCCACGAGCCTGTTACTCTG
GCCATGTTCTGGTAATCTAACATAGTTAACGTATTGTGAAAAGAAGTGCAACGGTTGGAC
CTTCCCTAGTTTCAGTGATGTAGAGGAATATATTTAATGACTGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E12111g_CDS-001

Protein length: 325 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0E12111g_CDS-001 MAFLRFTGRQSPARHEDHKYFVSTRPGRPQSVLSDETLVSRTIVSADKVAGRRRKFGDKL
RSLLRGDRDKADKAPVASKKSSMTLPKTSPVSSCVPKKAAAVAAAASKPAASTRPASPSP
SPACSDGFMFWHDPSDNLTPVTSHESFGSVDLSIEDTDVLEQLAEVPRCSNRISKSTSQS
SMASQLTIPNSVSCTSQLSAIAVSAFSDSGSDSGMSDSATCFGAEELDFDVKDAYNLGDW
GLPRGLTDGYSDSEDEDDLLDDIVDSVESVYAPVSAKTVGYTFCLAIWGKPEVRSKFLAL
QDRVNKNKEKEMPVHEPVTLAMFW*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG