YALI0D25124g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0D25124g

Location

Species Yarrowia lipolytica Positions 3350057..3352491
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 2435 (nuc.)
Previous locus YALI0D25102g Next locus YALI0D25146g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D25124g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D25124gYALI0D25124g_mRNA-001YALI0D25124g_CDS-001

Nucleotide sequence

 

>YALI0D25124g
ATGCTCCGACCCGACTGGTACAGGCTGGCCAAGGGGCCCACGACCAAGCGGTATTTTTCG
GTCGCTCACGTGACGCTCAAGCCCCACCCTGCGGCCTCTTCTCGCATGGCAGCGTCCGTT
CCAACCTCCAGAACAGATGGATACTACAAGACCAATGCCCGAGTCAGGGGATACAAGAAC
AGACAGAGTAAAGGCAGCAACAAAGACGACAGCATTGACAACGTGAAATTCATCAGCAAA
AAATACATTAATCAGGCAGAGGTCTACGAACAAGCGTCTCCTTCACGACAAAAGAGTCTC
CGTCACTCTGAACAGGTCAAACGGGACTATGACGCTTCTTTTCCGCCGTTGTATGCCCGG
AGAGTCGATGTGGAGACGTCGAGACTCCAAGAACAGCTCTACAGAGAAGATCTGAACCTG
CGGCAGAAACTGGCAAAGTTGCCCCAGCAACGAGCTGTTGTGGGAGGTATCATTATGAAG
ATTGAAGCCAGTGTGAAGACCCGAGGCAAGGGCTGGATGAACCACGGTCAGGTGATCGAG
GAACTGATCATTCGAGGAGACGTCTTTGAAGCTATTCTGGTGTTCAAATGGTACAGAAAA
GAAGAGAGTGTGAAGACCAACCTGGGGGAGATTCTCAAGGTTCTTCTTGCCAGCGAGTAT
CCCGGCTTGGCAGCCGATGTAGTCCAGCTGGCCCACCAGTGGCAAATTCCGCTTACATCA
TACCATATTGTGGCAGGTATCAAGGGTCTGAAGGAGACTGTGAATTCTGGGAATGCTGTG
GAGAAGCTCAAAGCTGCCTATCAGATGTGCGACTGGGCTCTCGCTCCTTCTCCAGAGAAT
GGAAACGAGCCGCAATTCAAGGATGCGGAGTTTGTGCTACCCCACGTGCTGTTTTTCGCA
TGGAGAGTGCCCCACAATGCCAGAAATGAAGTTCTTCATCTCGTCAACAAAGTATGCCCT
GCTTTCAAGGTGGACATTAGTCGAGCAGCGTTTCTGACACAGTACTTTGCGGGCGTAGCG
TATCATGTGACTCCCAACGACGAGGAGGCTACGATTCAGACCGTTGAAGACGCTGTCAAG
TTGCTTCAGAATGTGTCTCTTGTTGATGGAGGTCTGATGTCGTCTATCATTCTGGGTCTG
AGAGAACAATTCAAGAACCCTGTGGACGACAGTCTGGATTGGGAGCACGAGATTGGCGGT
CTGAAATGGAAAAACGTGCTTGAAATCGCTTTCCGAGCTGTCAGACCGGATAGAAAACGA
TCTGGACCTCTTGCCCACATTGATGTAAAGCGGGAGCTGGCTACGTGTTCTCAGCTGCTC
GGCATTTGTAATGTCTTGAACGACAACCAACTGGCCAGAAACTGGTTCCACAATTACGTG
CTTCCTGTGGTTCTTGAAGCTCCTAACAAGGAGCTCAGCCAGTTGGACAAGAATGGCAAT
GTGCAAGTTCTCAACATTTTCAACGTGTTTGCAGCTTTGGATAAGAACAACATTGCCACT
GAAGACTCGCGAGACCTTTTCTTGTCTGTTATGAGTCGAATCCCCAACTTGGATTCTCGA
CCAGCTCTTTCTCGATTCATTGCAGAGACTTCGAGACTTGAGAGAATCATTCTGAGCAAG
TGCCATGACGAGGCCACCGCCAAAAAGGTCCGTCAGACCGTCGACTCCACCCACAAACGA
ATCCTCGGAGGTCTTCCACATACTTGTGTCATTTCACGATCTCTGATCAAGTCCTGGAGA
TACGCCATTGGCGACGCAGCTCGAGACTACCATCGAGTCCCCTACTTGCGGTCCGTGGCC
ATCGACCAGCTGTTCATGTGGGATCCCAAAATTTCGCAGAACAGATCGTTCCTCAAGTCG
CCTGAAAACCTATGGGCGGTGGCGGAGATCTACGAGCTGCTGCAGGCCGAGTATGTCATC
ATGCAGCGATCTAGTCCCAAAAAGACACAGAGCATCCAGCAGCTTCTTCACGTGATGATG
CACAGACTGTCGGCGTTTGTGCCTGGCGGAATGACTCCCGAGATTATCGATCACCACCGA
GCCAACCAGGTGCTTATGAACATCATTTCCAAGAAGGCCATTCCCATGCCGTATGACTCG
GACGGAAAAGAACCCCAGTGGCTCATGGGACCGGAGTCCAAACCTGTCACTGCTGACGAG
ATAGCAAAGGCCAGAGTGACCAAGAAGTTTGGAGCCAGACCCAAGACCGAGCGAGCAGAA
AAGACGGAAAAGAGACGCGGAACTAAACGACTGAGACACAAGCCTACCAAGGACAAGTCG
CCAAGTGGAAACGAGATCCTCAACTCCATGTTGTCTATGCCGGACCAGTTCAAGCGATAA
AAACATTGTACATAGGCTTGTAGCTGATGGCTACGAGCAGATGAGTGGGCAACTGTCACT
CTGATTTATTAATATTGCATCTGATTGAGAGCGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D25124g_CDS-001

Protein length: 780 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0D25124g_CDS-001 MLRPDWYRLAKGPTTKRYFSVAHVTLKPHPAASSRMAASVPTSRTDGYYKTNARVRGYKN
RQSKGSNKDDSIDNVKFISKKYINQAEVYEQASPSRQKSLRHSEQVKRDYDASFPPLYAR
RVDVETSRLQEQLYREDLNLRQKLAKLPQQRAVVGGIIMKIEASVKTRGKGWMNHGQVIE
ELIIRGDVFEAILVFKWYRKEESVKTNLGEILKVLLASEYPGLAADVVQLAHQWQIPLTS
YHIVAGIKGLKETVNSGNAVEKLKAAYQMCDWALAPSPENGNEPQFKDAEFVLPHVLFFA
WRVPHNARNEVLHLVNKVCPAFKVDISRAAFLTQYFAGVAYHVTPNDEEATIQTVEDAVK
LLQNVSLVDGGLMSSIILGLREQFKNPVDDSLDWEHEIGGLKWKNVLEIAFRAVRPDRKR
SGPLAHIDVKRELATCSQLLGICNVLNDNQLARNWFHNYVLPVVLEAPNKELSQLDKNGN
VQVLNIFNVFAALDKNNIATEDSRDLFLSVMSRIPNLDSRPALSRFIAETSRLERIILSK
CHDEATAKKVRQTVDSTHKRILGGLPHTCVISRSLIKSWRYAIGDAARDYHRVPYLRSVA
IDQLFMWDPKISQNRSFLKSPENLWAVAEIYELLQAEYVIMQRSSPKKTQSIQQLLHVMM
HRLSAFVPGGMTPEIIDHHRANQVLMNIISKKAIPMPYDSDGKEPQWLMGPESKPVTADE
IAKARVTKKFGARPKTERAEKTEKRRGTKRLRHKPTKDKSPSGNEILNSMLSMPDQFKR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG