YALI0D25102g

Overview

Description weakly similar to uniprot|Q7RXQ1 Neurospora crassa NCU00157.1 hypothetical protein
Locus type CDS
Locus tag YALI0D25102g

Location

Species Yarrowia lipolytica Positions 3347388..3349033
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1646 (nuc.)
Previous locus YALI0D25091g Next locus YALI0D25124g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D25102g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D25102gYALI0D25102g_mRNA-001YALI0D25102g_CDS-001

Nucleotide sequence

 

>YALI0D25102g
ATGAAAGGTGAGTACGATGGAAGTGATACAGGCATTGGCACACAGTGATACAGACTCAGA
CTCAGCACAGACTCAGCACAGACTCAGCACAGACTCAGCACAGACTCAGCACAGACTCAG
CACAGACTCAGACACAAACGATGAGACACGGCCAACCATCTATTGACCGTATCCAGAACT
TGCACTTGAAAGAAATTGTGACTGGTTCCACGAAAACAATCACAGAGTACTGGAGAGATA
CTTGTCATGTGATTGGAGTCACGTCATCTGTGTGTAGGTGGAAGTTGCAACCTGAGACGT
CTGGCCTCTTGTTTCGTGCTAACACAGACCTCCCCCCTACAATTGTCACACAGCTCCAGT
CGTATCCTCCTGGAGCACAGATACAACGCCTGGTCCACATCGGCGACTCGCACAAACCGC
TGCGGCAACAATGTCTTGAAAAGGCCTTGGCAATCTGTCGTCAGTCCACTCGACAAGTTG
AGGCCTATGAACGTATTCTTAAACGGCTCGACAAACTACTGAAAGGAGCTGCCCCGAGTG
AGGACCGAGAGTGGATCGACCGGACGCGTGCTGAGAACGCGGAACAGGTGGATGAACTGA
AATCGCACAGATCCCAGGCCAAATTTGACGCCCTCATCGCACTCTATTTGTCGCTGGGCC
GGTTCCAGGAGGCAAGAAAGGCGTGTGCTGCTCGTCGCGACAACAACAACGACTGGGAAC
ACTCGCTGCATCTGCGAGTGATGGAGGCGCGGTCGCAGTTTCTGGATGGAGAAAAGGTGA
CTACGATCCACAAAGTTCTGGATTCGCGAGACGAGCTGAAACCCCTGGATCTCAACCTGG
CGCTGTTGCTGGCAGCTCTGCATGAGCTACAGGCGACAACGACCATGTCCAGCCACTCAG
GGGGCCCTGCCACCGTCACAATTGCACCGTCTGCTTTTGCAAAGGCTGTAGAGTACTTTT
TGGACATGGACTTTGAGTACCTAAAACACTACGACGATGTGGCTTTGGGGCGAGATGTCG
GCAGATATATTGCCGTGTGTGCCCTCGTATCCTTTTCCCGTGCCCAGCTGTCGACTCTGG
TGAATCAGAATTTTGGTTTTTCTGAGCTCGTTGGCGCCGATTCTGACATTATGAAAATGC
TCCAGAGCTTTCTGGATTCAGAGTTTCTGCAGTTTTTCAAGCTGTGGAATGTTCTTGTGG
GCGAGCTGCCGTTTGATCTGGTCTTTTCTGATATCGTTAGCTCTGTGGATAGCCTTCTAC
GTGAACGGGCTCTGATTCAGGCCATTTTTCCATACACGCAATTCCGGCTGGACGAGCTGG
CTCAGTCGTTTGATATGGAGCCCGATGAGCTGGAGACGCTGTTGCGGCAGATGATTGTAG
CCCTGGATCTCAAGCTCAAGATTGACAAGATTGACGGCACTGTGACGGCATACCAGAGCG
ATGGGTACTCGCAGCTGAAGCAGAACAAGATGTTGGCCAAGGCGTATGTGAGGAGTGCTA
AGATGGCCATGTTGGCCCTAGACAAATGAGGAAAGGTGGCGTAGCTTGGAGAGGTGACGG
GGCTACTTCGAGCGGCGACAGTGAGGTGGGTGTGGCTGTTCCATGGCACCGCACTGTACT
TAGAGAATGCATATCAAGGTCAGTCG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D25102g_CDS-001

Protein length: 403 aa.
Product: Conserved hypothetical protein

>YALI0D25102g_CDS-001 MKDLPPTIVTQLQSYPPGAQIQRLVHIGDSHKPLRQQCLEKALAICRQSTRQVEAYERIL
KRLDKLLKGAAPSEDREWIDRTRAENAEQVDELKSHRSQAKFDALIALYLSLGRFQEARK
ACAARRDNNNDWEHSLHLRVMEARSQFLDGEKVTTIHKVLDSRDELKPLDLNLALLLAAL
HELQATTTMSSHSGGPATVTIAPSAFAKAVEYFLDMDFEYLKHYDDVALGRDVGRYIAVC
ALVSFSRAQLSTLVNQNFGFSELVGADSDIMKMLQSFLDSEFLQFFKLWNVLVGELPFDL
VFSDIVSSVDSLLRERALIQAIFPYTQFRLDELAQSFDMEPDELETLLRQMIVALDLKLK
IDKIDGTVTAYQSDGYSQLKQNKMLAKAYVRSAKMAMLALDK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG