YALI0D23199g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0D23199g

Location

Species Yarrowia lipolytica Positions 3009541..3011321
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1781 (nuc.)
Previous locus YALI0D23177g Next locus YALI0D23221g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D23199g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D23199gYALI0D23199g_mRNA-001YALI0D23199g_CDS-001

Nucleotide sequence

 

>YALI0D23199g
ATGGTCCTTCACAACAGCAAATGGGATCGCAAGGCGAAAAAGCAGTATGAAAAGAAGCAC
GGAATTGTGTCTGATCACGAGAAGGCCAAGCAGGAGGCGATTCGAGATTCGGTGCCTGAT
TTACCGTCCAATGCCTGGCGGTTTGACGAGGTCAAGGACGAAGGAGCAGAATCTTCCGAT
GACGGTATTGACTACTCGAAATTGAAAGCGAAGCAGATGGATCTGCCGCGTGGCTCTTTA
TATGAACGGAACATTTTGAATGGAGACAAGGGAGGGTTTTCCGATAGCGACAATGACGAT
GAGGATGAGGAGGGCTCCAAAAAGGCCTCCAGAATGCTCCAAGAAGTGTCCGAGGCCGAG
AAAGCCAAGGCCAAGGAAATGCGCGAGAAACGGGCCAAGGCAAACCAACTCATGAACCTC
AAGAAAAAGTTCATGGCGACAGAGATGGAGGAGGGCGATGTGGATGATGACGACTTTTTC
AAAGAGATTGACGGGGTGGAGAGAGAGGAGGAGAAGACGGAAGAGAAAAGAAAGGTTGGA
AAGTTGCCGACCAAAGGACAGCAGGATTTTCTAGACGGTTTGCTAGGATAAGTAGTGTGA
GACACGCAACAAGCAAAGACGATCTGACTGCAGATTTCTTTGGTTGCAACCAAACCAGTT
CACTGCCATACAGCGAAATGAGATGACATAGCTTGTTAGGGTTCTTTAATCCTCTAGCTT
GTCTCTTTGGTCAAACCACCTTCACATTGCTGTTCAAGTCTTCAGACCTGTCAATGAGCA
ATCTGTTTGAAGTTGAGAGGATGAGTTGTTTTGTTATTAACTGAGACTTCACATCAACCT
ATGGCATTTCTTTTGTCTTAACAGATAGATTGTGAACTTCCGTGACCGAACATGAGCTTC
CGACAGCTACTTTTCCCCACAGTAGGTAAACCTGAAGAATATTTATTATCCCCGATCGCT
TCCTTGTAAATGGTTTGACACCCTCCCTGTCTTGCTCTCTCAACCTACCGCCTACTAGAT
TACTTCTACCAGACAAACTCCTCTTATCACTATCAGTACCTATCACACATATGACTGATG
TCCAGCCCACTCTGATCACGCCGTTTGAGTCAGTAGTCCAATGAGTGTATTGACCATCTG
CTCTGATAGCATATCTGACAGTGAAATTGCTTTCCAATGGTCGCCTGGGATATTTGCTAA
GATCGAAATACATCAATCATGAACATGGGTTTTCGGGGGAGCAGCGAGACTGAGGTCAGC
ACAAGGAGTGTAAGTAGGAGGGGCTTCGTCGGTTGATGGATGATCGTCGGTTGGTGGAAG
ATCGTCGGTTGATGGAGAATCTTCGGTCGTTACTGGAAGGTTGTTGTTACTGGAGGGTTT
GTCATTACCGGACCCTTCGCGATGTTTTGGCCCTGGCGAAAACAACATCTTGTTTCAACT
CACAACCGCATGCGAAGATGTATCCAGCCAAGCACATGAGAATACTGGGCCAAAAATGCC
CAGTATCGTAAGATCAACGACCCGATACTCAGTATACTTATCCGGACACCATTATACACA
TCAGGGCAGACCATGTTGCTCAAAAAAGACGGTCAGCATAATCTACAAGAGTCTAACCAA
ATCACACTCTTAGAGAGAATGCACCTATACTGTACAATTGTAGTCTGTGATGTTTCATAA
TGGGCATGTTAACGTTGCTCTACTCTTGATACCACAACCGATGTCCCTGAAAGTCCTTCC
TGTAAAAAGTCTTATATGTACTGCTGCTACAGCATGTCCTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D23199g_CDS-001

Protein length: 197 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0D23199g_CDS-001 MVLHNSKWDRKAKKQYEKKHGIVSDHEKAKQEAIRDSVPDLPSNAWRFDEVKDEGAESSD
DGIDYSKLKAKQMDLPRGSLYERNILNGDKGGFSDSDNDDEDEEGSKKASRMLQEVSEAE
KAKAKEMREKRAKANQLMNLKKKFMATEMEEGDVDDDDFFKEIDGVEREEEKTEEKRKVG
KLPTKGQQDFLDGLLG*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG