YALI0D23177g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0D23177g

Location

Species Yarrowia lipolytica Positions 3006181..3009093
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 2913 (nuc.)
Previous locus YALI0D23155g Next locus YALI0D23199g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D23177g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D23177gYALI0D23177g_mRNA-001YALI0D23177g_CDS-001

Nucleotide sequence

 

>YALI0D23177g
AAGCTTTTCCCCAGCAGAGGACTGGCGATATTGACGACTGACGATATTGACGACTGACGA
TATTGACGACTACGATATTTCACAAGACGAGACCTTCCCGCATCGTACGCAGACGACAGT
GTACAACCGACCGAGCACACAAAACCACAAGGAAATCCTCCACAACCACTACAAGACACA
CCACCATCTACTTGTACACGACACAGGTAGTTCCATAGCAAAGGTCTATCAGACGAACAA
ATTGCAAGATGTGAGTATGGCAGCATGAGCAAAGCGAATGCTTGGAATCCGATCAAACAG
GGATGCTGTCGCTTGGAGCAGTTCATGCCAAGGCTGTTAGTAGACGTCAATGCAGGTGTC
AGGGTCAGAGCAAGTTTGAGCTGAGCTGGTCGAGGCGAACCAGAGGATCATGGATCGACT
GTGTGATCAGGTCGGCGACGATCATGGCAAATACCTTGTTCCGTTGTCCTACCCGAGATT
GGTCACCGGTTATACATGAGCGGCGTGGTGGCGTTGTACAATGGTTCTCCAACTTTCGTT
TGCCACACTTGTCTGGTATCAATCACATGTTCCTTCTTTGGACATGTCGAGGATTCCCAG
TGGCGCAACTTGTTGTTAACTGGTGGTCTTCTACAACCCTATGATCATCTCCCACCCGGT
GATCAAGTTGATTACTTCTTGGAGGTTGTGTCGGATTGCCACTCTTGTCTCACACTGGTA
AGACTGCTCGTTCCCAGTACGCTGAGACAACTCAGTTACTCAGTCAGACGTTCACTTACG
GATTGGACATGAGCAGATTTCGACTCATGACTGACTACTGCAGTCCTTGTTCCTGATCTC
TACATTGGGTTTGGCATATGCTCCGACGTGGTGTGAGTTTGTCTCTGCATCATTTGTCAT
CTGTACTCCAACGCTGTGACAAATCGGTGTTGGATACATATTACCGTCCAACGCGGAGAT
GTTTTTTTAATGACATTTGTTGCTGTTCAATCTATGGTCAGTCGTATTAACTCAGCATGG
CCACCGTCCTACCTCTAGGCCTCCCATCACACATGAAGTTAGCACCCCCAGACCTGTCGG
TGTCTGACCACAATCTCTCCGAGCCCGAACATGCGGACCTCTCGTCCTCGTCGCAGGACT
CGGACGACGACCATCAGCGACACAAGCGCGCAGCCGTTGAGTCCTTCTTCTTTGCGCGCT
CTCACAACAACAAGGCTGGGCTCGTGATGCAAATCCAGCGACTAGCACCCAAGGGCGACC
AAAAGACGCGCCCCACACCGCTGTTCAACGTCCAGCGAAAGAAACACAGACTGTTGAAAC
CCGTGCATGGAATTCTACGATCGGTGGAGGGAGCGGCTGGCATTGTTGGCGCAAACTCGT
CCCGAAGACATTCGGACCAGTTCTACTGCACCCGCCACTCGACCACAGCTCTGTCGCGAA
ACAATTCGGGCAGATGTCGAGTCGTCGAGGGAGCCACTCTGCCCGTCCCCAAGTCCGGTT
TTAACCAAATCGCCTTTGATGGCATTGAGATGGAGTCGTCGCCACCCACTTCGCCGTACC
TCGGTGGGGCAGATCACTCCTTCTCCTCCGTGTCACTCCCAGATGTGGCCAACACAACCA
CGGGGAGTCACGTGCCCGCCCATCACACTGGCGAAGATGACTCTTCTTCTGACAGAGGCG
TCTACCACGTATACACTGTGGACGAGCATCCGCAGTCAGCCGGCCGAATCACTCACTCTG
ACATTCGTTTCAACGTGTCCGCCTCTGAGGCCGACCAGTCGTACATCAAGGACCCCTCAT
CGGTCTCCCCACAAACCTCTGCCACCGGGGGGTCTCGACGCCAGACCCTTCCGCCACGTG
ACTCGCTGCAGGCCTTCCTGGCAACGCCCATCACGTGGCATCTCAAGCAGGTTGGCGCCC
GCACCTACCGACTCGTCGACTCGTCCACAGATATGGCCATTGGCTACTGGACCGGCGAGC
GTGGCTGGCGGTTTGTGTCCAAGGGCGAGACCCTCATGTCTCTGTCCGAAAAAGTACGTG
TGTACTCGCCCATGTTCCGCAAGCCCATGTACCTCGACCAGGTGGTGCACCGGCTGCGAA
CCAAGCATTGGGCTGACAAGTCTGACGAGGACAGCCATCAGTCCCGGCGGCGAAGAGCGT
CGACGGTCCCCCACGCACACGGCCACAATTACCGTGTGACGTTGGTGGATGCGATTCTCT
TCTCCGCCATTCAGCTGCTCATGCAGCAGCAGCTCCAGCAGGCCGCAGCCGAATCCATGG
TTGTGGCCACACCGTCGCTGTACACTCTGCCTCAGTCTGACTCGCAGCTGAGTTTCAAGA
ATGTGCGACGGTCGCTGAGTCTGTCACGACCCAAGTTGGATTCGCGACAGTCGCTCCAGC
TTGATCACAACACACGGCCTGAGACTGAGAAGCGAAAATCGTTTTCCGAGCACCGCAAGT
CGTGGACAGGCTCGATTTCGCACCGACGCAAGTCCGTGACACCGTCTCCGCCGCCAAACA
AGCGCATGCTCGACGTCAGAGACGTGCCAGATCTCCAGGAGCATCACCATAGCACCCCCA
AGAAGGCTGTGAAGCCCCCCAAGACCGTGAAACATACACGGTTCGACTCGCAGCCGGAAA
ACATCCCAACGCTGCATGAGCCGGCGAGAGACGTGAACGTGAGCGTACCTGCTCGACGCC
ACTCCCACCGCTCGTCCCGACGCTCGGCTCCCCCCGCCCCAGTCGTCTCGCATTTCCACG
AGGCCATTTCCGAGCCCATTCCTGCCGTTCAGGCCGCCAAGAAGAGAAACTTGGTGGCTC
GCTTCTTCCAGAAGGTGAAGCAGAACATGAAGTAGGATATAATTTATTGCATTACATACA
AGTACAAAGTGGTTGTACATTGATTGAACAACA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D23177g_CDS-001

Protein length: 613 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0D23177g_CDS-001 MATVLPLGLPSHMKLAPPDLSVSDHNLSEPEHADLSSSSQDSDDDHQRHKRAAVESFFFA
RSHNNKAGLVMQIQRLAPKGDQKTRPTPLFNVQRKKHRLLKPVHGILRSVEGAAGIVGAN
SSRRHSDQFYCTRHSTTALSRNNSGRCRVVEGATLPVPKSGFNQIAFDGIEMESSPPTSP
YLGGADHSFSSVSLPDVANTTTGSHVPAHHTGEDDSSSDRGVYHVYTVDEHPQSAGRITH
SDIRFNVSASEADQSYIKDPSSVSPQTSATGGSRRQTLPPRDSLQAFLATPITWHLKQVG
ARTYRLVDSSTDMAIGYWTGERGWRFVSKGETLMSLSEKVRVYSPMFRKPMYLDQVVHRL
RTKHWADKSDEDSHQSRRRRASTVPHAHGHNYRVTLVDAILFSAIQLLMQQQLQQAAAES
MVVATPSLYTLPQSDSQLSFKNVRRSLSLSRPKLDSRQSLQLDHNTRPETEKRKSFSEHR
KSWTGSISHRRKSVTPSPPPNKRMLDVRDVPDLQEHHHSTPKKAVKPPKTVKHTRFDSQP
ENIPTLHEPARDVNVSVPARRHSHRSSRRSAPPAPVVSHFHEAISEPIPAVQAAKKRNLV
ARFFQKVKQNMK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG