YALI0D22803g

Overview

Description similar to uniprot|P40024 Saccharomyces cerevisiae YER036C ARB1 ATPase of the ATP-binding cassette (ABC) family involved in 40S and 60S ribosome biogenesis
Locus type CDS
Locus tag YALI0D22803g

Location

Species Yarrowia lipolytica Positions 2949682..2951662
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1981 (nuc.)
Previous locus YALI0D22770g Next locus YALI0D22825g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D22803g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D22803gYALI0D22803g_mRNA-001YALI0D22803g_CDS-001

Nucleotide sequence

 

>YALI0D22803g
ATGGCTGTGTCTTCCAGTAAAGCCAAGCGAGAAGCCAAGAAGGCCGAGAAGGCCGCCGCC
AAGGCAAAGGCCGAGGGAAAGGAGGTTGGAAAGTCCGTGGACGAGATTGTGGCGGAGAAC
ACTGAGAAGATCAAGGAGCTCAAGATGCAGAAGGACAAGGACGGTCTGTCGGATCGAGTT
ACCACCGGTGTGCTGGCCTCTCTGGAGACGTCACGTGATCTGAAGCTGACTTCTGTGTCG
CTCAATTTCCACGGAAAAGTGCTGATTCAGGACTCCACTCTCGAGCTCAACTACGGCCAG
CGATATGGTCTTCTGGGAGAGAACGGATGTGGAAAGTCGACTTTCCTCAAGGCTTTGGCC
GAGCGAGAGTACCCTGTTCCCGAAATTATCGACATCTATCTTCTGAACGAGCCTGCTGAG
CCCTCCGAGTGGTCTGCTCTGGAGTACGTTGTGCGAGAGGCCGAGGCCGAGCTCAAGCGT
CTGGAGCACCAGGTTGAGAAGATCCTTGAGGAGGATGGCCCCGAGTCGCCCATTCTGGAG
GATCTGTACGAGCGAATTGACGACATGGACCCCACCACCTTTGAGTCTCGAGCCTCTCTG
ATTCTGGTCGGTCTGGGTTTCAACTCCAAGACCATTAAGAAGAAGACCAAGGATATGTCT
GGAGGATGGAAGATGCGAGTTGCTCTTGCCAAGGCTCTTTTCGTCAAGCCCACTCTTCTG
CTGCTCGATGACCCCACTGCCCATCTGGATCTGGAGGCCTGTGTCTGGCTTGAAGAGTAC
CTCAAGAAGTGGCCTCGAACCCTGATTCTCGTGTCGCACTCCCAGGATTTCCTCAACGGA
GTCTGCACCAACATGCTTGATATGCGAATGAAGAAGATGCTACTGTACGGAGGAAACTAT
GACTCTTACGTCAAGACCCGAAACGAACAGGAGACCAACCAGATGAAGCAGTACCACAAG
CAGCAGGAGGAAATCGCACACATCAAGAAGTTCATTGCTTCCGCCGGTACTTACGCAAAC
CTGGTGCGACAGGCCAAGTCGCGACAGAAGATTCTGGACAAGATGGAGGCCGACGGTCTG
ATTGAGAAGGTGGTGCCCGACAAGGTGTTTGAGTTCCGATTCCCCGCCGTTGAGAAGCTG
CCTCCTCCCGTTCTGTCTTTCGACAACATCACCTTCTCCTACTCTGGTAACCCCGAGGAG
AACCTGTACGAGAACCTCAACTTTGGTGTTGATATGGACTCTCGAATCGCTCTGGTTGGT
CCCAACGGTGTGGGTAAGTCCACTCTGCTGAAGCTCATGACCGGTCAGCTCCAGCCTACC
GGAACCGAGGGCCGAATCTCGCGACACACCCATCTCAAGATTGGTGTCTACTCCCAGCAT
TCTCAGGACCAGCTGGATCTCACCAAGTCTTCTCTGGAGTTTGTCCGAGACAAGTTTTCC
CACATTTCTCACGACTTCCAGTACTGGCGACAGCAGCTGGGTAGATTCGGACTTACTGGT
GAGGGCCAGACTGCCCTCATGGCCACTCTTTCCGAGGGTCAGCGATCTCGAGTCGTTTTT
GCCCTGCTTGCCATTGAGGCTCCTAACATGATTTTCCTTGATGAGCCTACTAACGGTCTG
GATATTCCCACCATTGACTCGCTGGCTCAGGCCATCAACGAGTTTGACGGAGGAGTCGTG
GTTGTTTCACACGATTTCCGACTGTTGGACAAGATCGCCAAGGATATTTTCGTGTGCGAG
AACAAGACCGCTACCAGATGGGATGGCAGCATCTTGTCGTACAAGGCCAAGCTGGCCAAG
AACGTGGTCGTTTAATCTGGCTTGTAGCGACAGACTGAACGTTTCAGATTGTGAGCATAG
CCGGCAATCTGGACACTTTTTTCACACACATCTTCACACACCGCTGATTACGGTCAATGG
TTAGAAAGGGGACGAAAATAGAGTAGAGTAGATAGACTAATGATTCATTGAGACTCGTGT
A

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D22803g_CDS-001

Protein length: 605 aa.
Product: ATPase of the ATP-binding cassette (ABC) family, putative

>YALI0D22803g_CDS-001 MAVSSSKAKREAKKAEKAAAKAKAEGKEVGKSVDEIVAENTEKIKELKMQKDKDGLSDRV
TTGVLASLETSRDLKLTSVSLNFHGKVLIQDSTLELNYGQRYGLLGENGCGKSTFLKALA
EREYPVPEIIDIYLLNEPAEPSEWSALEYVVREAEAELKRLEHQVEKILEEDGPESPILE
DLYERIDDMDPTTFESRASLILVGLGFNSKTIKKKTKDMSGGWKMRVALAKALFVKPTLL
LLDDPTAHLDLEACVWLEEYLKKWPRTLILVSHSQDFLNGVCTNMLDMRMKKMLLYGGNY
DSYVKTRNEQETNQMKQYHKQQEEIAHIKKFIASAGTYANLVRQAKSRQKILDKMEADGL
IEKVVPDKVFEFRFPAVEKLPPPVLSFDNITFSYSGNPEENLYENLNFGVDMDSRIALVG
PNGVGKSTLLKLMTGQLQPTGTEGRISRHTHLKIGVYSQHSQDQLDLTKSSLEFVRDKFS
HISHDFQYWRQQLGRFGLTGEGQTALMATLSEGQRSRVVFALLAIEAPNMIFLDEPTNGL
DIPTIDSLAQAINEFDGGVVVVSHDFRLLDKIAKDIFVCENKTATRWDGSILSYKAKLAK
NVVV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG