YALI0D22825g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0D22825g

Location

Species Yarrowia lipolytica Positions 2953362..2957226
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 3865 (nuc.)
Previous locus YALI0D22803g Next locus YALI0D22847g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D22825g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D22825gYALI0D22825g_mRNA-001YALI0D22825g_CDS-001

Nucleotide sequence

 

>YALI0D22825g
ATGGGCCTGTTTACGAAAAAGTCCCGTGAGGCGCTCAGCGACACGCCCAAGCTGTCTGCC
CTGGCACAACAGCCCGACCTCCCCGTTCTGAGTCCCCCTCCGCTTCCTGCAGCGTCGCAA
AGAGCCGTTTCAGGGGGCTCGGTCTCCTCTCTCAATGAGCCCAAGGGATACACTTTGCGA
GGCAAGCTGGGGCTGGCCAAGGCTCCACAGAACGTATTTGACGGGTTTGACGGCGCCCAG
GTGCCGGACGGAGCTTCTGGATACAACGACTCAATCTACGATGAACAGCTCCCGGACGAC
GACGCAAGCATCTACGACAGAAGCAGATACGAGGAGAGCGTCTACGGAGATGAGAGGAAT
GCACAGAAGCAACAGCCACCTCAGTCGGAACACTCCTCGTCGAACAATACAGACTCCAAT
CTGCCACCACCAATCAACACCTTTGTTCAGCATGGCACTGTTAAGCAGTACACTCCTGAG
TTTGGAGGGGCAGAGTTTCCACCCGGAGGAACTGATGGCTCGTCTCATTCGCCCCACAGC
TCGCAATTTGCATCGCCTACAGGAGAGTTTCATTCAAACCGAAGTTCGCCCGTAAAGCCG
CCCCCTATCACTATTCCAAAGGGAAGATCGTCTCCGCTCGCCTCTGGGAAGTCGCCCATC
GGGATCTCTTCTTCTTTTGGAATGAGCCCTTCTACTAATCAAATTAGAAGCCCACTGGGT
TCTCCTTCATACATGCTTCCTACATCTACTTATGGAGAGTCACCCAAGGGCAGTGGTATG
GCTTCAGCAGCAGCAGCTCTGGCGATGGGAGTATCCTCGTTCAAAACCCCTCCGCTGGCC
CAGAAAGCCCAATTCGGCTCTCCACAGACCTTTTCAACTCCCTCTCAAGCATTGGAAAGC
ACCCATCCTGCTGATCACGTCAACTGCTCCCATGGAGGTCATTCACACTCACATGCTGCC
TCTCCTGGGTCCCCTCGAGTGACTTCTCCCACAGTAAGATCTCCTCCACCTCCTTTGGCT
CACCCAGGCTACCCCAAAGAACACTACATTGCGAAAAAGAAGAGTTCTGAGGCCCTTGGA
GAGGTGCTACCTGGGAGAGATCTCTACGCCGAAGCCAAGAATGACTACCCTTATCCACTT
ACTCCGGCTGACCTTAAGACCGCCCCTTACCCTACCTGTTATTATCAGAAGGGATGCCGT
GAGATTGGCCCTCATTCCCATGAAGAAGAGGAGAAGGTGGATCCTGTTTTCGCGACTTTT
GACCAGTCAAAGTATGACGAGATCCAGCGTGAGTCACGTGATCAACAAGAGAAGGAGAAG
CTCATGTGGGGCAAATCGGGTTCCAGCGATAAGCGCTTGTCTACTGACCAACAACGAGCA
GAATTGTCTTCTACAGGTTCAGACAAGTCTAGAGGTTCAGACAAGTCTAGAGGTTCAGAG
CCACATGATACGGGATCTGGAGACTCTGCATCAAACCGAACAGAGTCACGTGCGGTCGAT
TCATCCGACTCTCGGTTTGCCGAGGCTGAATCTCGGGCCACAGAGTCTGCGGAATCCAGG
TTTGAGGAGGCCCAATCACATCCGGGATCGTCTCATGCTGAATCAGTTGAACCAGAGTAC
ATTCCAGCAGACTTGCACAGGGCAGAGTCTTCAATTTACCCTGCTGAATCTGTGTATTCT
GCCAACCGAGCTGAAGAGACTGATCCGTATGCCGAGTCTGTGTATTCCACCCAGCAGGAG
CAGCAATCTGAGTCATATGATCAGAATGTGAAAGAGTCCCATGACCAGTCGACCGACCAC
CATCACAATCCACCTCCCTCGTCCATCGACGACTTTGACTTCAACTCAGGAGCACACACT
CCAACAAACAGACTGCCCTTGGACTCGCCGGGAACGCCAGGAACACCCGAATTGACACGT
GATTTCAACCGACTGTCTGTGTCTCATATCAAGGGTATGGGCCTACCTCTGGATACACGG
TCGATTGGTAGTGGTGAAGGTCACGCCCCACAAAACCATGTCAACCACTCGGTGCATCAC
GTGGGACACGAAGCCGATCTTAACCACGGTCAAGTGACCCACGGCCAGGTTGTTGGAGGT
GGTTCTACAAATCACATGATGCTAGCTGAGCCTAGTCAGGCGGAAATCCTACGATCTTCT
TATATTTCCACGGATTCTGGAGGTGGGTTGAGTCACATGGGCGGTCCGATCGGCTCTACG
GGTCATGTGATGGACCGTCACATGATGTCACCGGACCAGGAAGTCTTGGAGGGTCATGTT
ATGGACGAGATTCAGATTGACGGAAATGGGCATGTGATTCAGAACCCGAGTCCCGGTCAC
ATGAACTCCCGCTCTGGCACCATGATGACTAACATGACTGGTTTGAACTCTCCCTCTGCC
GCTTACTATCCTGCTCCAATTCCCATGAATCTGAAGCTACCCCCCCTACTTAGTAAGAAG
AATAGGCGCTTGTCTCGTTCTGGAATTTCTCCCTTTCCTTCTCCTCGCAAGAGTTCGTTT
TCATCTGCTTTGGACAAGCCTGGAAACCGTTCCTCTTTCATGTCTCCTTGGTCTCATACT
CCAGATGGATCGCTACTTCATTATGAAGGCTTTGCGGAGGACTTTGAGCGCTCGGGACGT
TCTGTGCATCGACAGAGTCTTGGATCGCGGGGTAGTTCTCCTCTGAAGAAGCTGTACCTA
TCCGGGGACTCACGTGAAGCATCTAGAGACGCTTCTAGGGACGTTTCCAGACTCTCCCGC
GACTTTGATGAAGTTTATGGCGAATTCGACGAATCGGCTATTGATTCATCGGACACCGAT
TTACGTGATCCATACTACAATCCTCAGAAGCGAGGAAGACGACGAACCATGTCCCTGACT
TCCATTAATGTCAACATGGACAATTCTGAAGTGAGAGAAGAACTGGACGAGGGCGACGTT
GAAGGCGATGTAACTGATATGCAGCGATACGAAGCTTCTGCCAACGCCTTTACACGTGTT
CATATCGACTCAAATGCCATTGTTCCTCCCTCGGCTGCTGCTGGCTATGGAAACGGTATT
TCTCCCGGTCTTGATCAGAAGCCTGGAACTCTAGTCGAAGAGTTGGAGCTGCGGAAGAAG
GACAAGAAAGCTGTTCGAGGACATCTCAATAAGTCTATGCATCAGTATGCTGCTGACGGC
ACTGAGACTCCTCTGATTCAACAGATTCACGATTCTCAGTCTGCTTATGGTTTTGATGAT
AGACGCAATTCGTTGATTTCAGACAAGAGAATGTCCATGATGACTGGAATGTCTGGAATG
ACCGGGATGACGACCAAGGAGCACTCTTACGAGGATCCCAACCATCATAGAATGTCTCTG
TTGGCTCTGGACTCGCTTGCTCAAATGGATTACCAGCAGAGTTACTCCAAGCCCGGAGCT
GCCCAGATCAGCAAGCAGTACAAGGCTTCGCGTGATGACGACGAGCCTCTGCGGGTGCGA
AAGCAGCGGTTGAAGCGGCAGTCCCAGCAGCTGCTCGAGCAGCGACAGCTCCAGGAAAAT
ATCGAGAAGCAGCGACTTGCGTCGATCGAGCTGGAGAAGAAGCGACAGGAGGTCAAACAA
CAGAGACGCAACCAGTTTGGACAGAATGCGGCTGCTGCGGGGGCCCAGAAGAAGGGCAAG
GTGTTGATTGGGCCTGGTGGAGAGGTGATCAGAACCTAGCTGTAAGCGAAGCGAACAGTT
ATGGACTGAGGACGAGGAAAGTCTGGAAGAGTTCAAGGGAAGTCAGGACGGGTGCCTGAA
ACTCTTGTGTCATTCTTTTGTCACTGACAAGATGGTTGTCTCTTCTTGCATGTAATGAAT
TTATCGAATGATGTTTATTACAGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D22825g_CDS-001

Protein length: 1233 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0D22825g_CDS-001 MGLFTKKSREALSDTPKLSALAQQPDLPVLSPPPLPAASQRAVSGGSVSSLNEPKGYTLR
GKLGLAKAPQNVFDGFDGAQVPDGASGYNDSIYDEQLPDDDASIYDRSRYEESVYGDERN
AQKQQPPQSEHSSSNNTDSNLPPPINTFVQHGTVKQYTPEFGGAEFPPGGTDGSSHSPHS
SQFASPTGEFHSNRSSPVKPPPITIPKGRSSPLASGKSPIGISSSFGMSPSTNQIRSPLG
SPSYMLPTSTYGESPKGSGMASAAAALAMGVSSFKTPPLAQKAQFGSPQTFSTPSQALES
THPADHVNCSHGGHSHSHAASPGSPRVTSPTVRSPPPPLAHPGYPKEHYIAKKKSSEALG
EVLPGRDLYAEAKNDYPYPLTPADLKTAPYPTCYYQKGCREIGPHSHEEEEKVDPVFATF
DQSKYDEIQRESRDQQEKEKLMWGKSGSSDKRLSTDQQRAELSSTGSDKSRGSDKSRGSE
PHDTGSGDSASNRTESRAVDSSDSRFAEAESRATESAESRFEEAQSHPGSSHAESVEPEY
IPADLHRAESSIYPAESVYSANRAEETDPYAESVYSTQQEQQSESYDQNVKESHDQSTDH
HHNPPPSSIDDFDFNSGAHTPTNRLPLDSPGTPGTPELTRDFNRLSVSHIKGMGLPLDTR
SIGSGEGHAPQNHVNHSVHHVGHEADLNHGQVTHGQVVGGGSTNHMMLAEPSQAEILRSS
YISTDSGGGLSHMGGPIGSTGHVMDRHMMSPDQEVLEGHVMDEIQIDGNGHVIQNPSPGH
MNSRSGTMMTNMTGLNSPSAAYYPAPIPMNLKLPPLLSKKNRRLSRSGISPFPSPRKSSF
SSALDKPGNRSSFMSPWSHTPDGSLLHYEGFAEDFERSGRSVHRQSLGSRGSSPLKKLYL
SGDSREASRDASRDVSRLSRDFDEVYGEFDESAIDSSDTDLRDPYYNPQKRGRRRTMSLT
SINVNMDNSEVREELDEGDVEGDVTDMQRYEASANAFTRVHIDSNAIVPPSAAAGYGNGI
SPGLDQKPGTLVEELELRKKDKKAVRGHLNKSMHQYAADGTETPLIQQIHDSQSAYGFDD
RRNSLISDKRMSMMTGMSGMTGMTTKEHSYEDPNHHRMSLLALDSLAQMDYQQSYSKPGA
AQISKQYKASRDDDEPLRVRKQRLKRQSQQLLEQRQLQENIEKQRLASIELEKKRQEVKQ
QRRNQFGQNAAAAGAQKKGKVLIGPGGEVIRT*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG