YALI0D22770g

Overview

Description pseudo similar to uniprot|P13185 Saccharomyces cerevisiae YDR122W (ohnolog of YLR096W) KIN1 ser/thr protein kinase, pseudogene
Locus type CDS
Locus tag YALI0D22770g
Pseudogene This locus may contain pseudogene(s)

Location

Species Yarrowia lipolytica Positions 2943666..2947265
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 3600 (nuc.)
Previous locus YALI0D22748g Next locus YALI0D22803g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D22770g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D22770gYALI0D22770g_mRNA-001YALI0D22770g_CDS-001

Nucleotide sequence

 

>YALI0D22770g
CTAGGACCACTTGACCACCCCCTCCATTCTTCGGACTTCTTCGATTGGCGGTCCAGCAGG
TATCAGGCCGAGTTCTTTGAGCGACGACAGCAGTTGCGCAGCGGCAGAAAGTGACTGGTC
ACGTGAGTATTGCGGTTTGTGTGGAAATTCGCGCATGCTAACACAGACAAGACACCAGAG
ACACAAAACGGAAGACTTCGAAACGACATCATCAAGTGCGCAGCGCGACACAAGACCAGC
GACAGACAGATTAGCAAGCGTCGACAAAACGACTCCCGGCGTATTATTCTTGCTCTCGAC
TTTGCCACTGTCTACATTCGACCCAAAACACACATCCACGGACCCACATCAGCTCCGTGA
TCAACGACAGTATCTAAGGCCCCCCCCCCCCCCCCCCCCCCCCCTTCCCAACCCCTCCGT
GACCCACAATATTAGTGCAGTCACCCCATATCACATCACACACAACCTCTGTCTCTACCC
CTTCTAGCATGACAGAACCAATGACATCACCGGCACCAGTGCCGGCGCCTCCCCCCGAGA
AACGGATGCAGAAACGACGCTCAATCGGCGAGTGGGACTTTGTGAAAACAATCGGAGCAG
GCTCGATGGGCCAGGTTAAACTCGCCAAGTCCAGAGTCACCGGCGAGCTCTGCGCCGTCA
AAGTGATCCCGAAGGCCACAGCCCAGCACAAGCGACCGCCCGATGAAGAGGCCAAGGAGT
CGGACATCAGCAAAGACATCCGAACGGTCCGAGAGGCAGCCATTGGCAAACTACTGCACC
ACAAGTACATTTGCGAAATGCGCGAAATGTACACCATGACGAACCACTACTACATGGTGT
TTGAGTACGTGGCTGGAGGCCAGATGCTGGACTACATCATTTCGCATGGCTCTTTGAAAG
AACGACACGCGCGAAAGTTTGCTCGAGCCATCGGATCGGCTCTGGACTACTGCCACCAGA
ACAGTATCGTGCACCGGGATCTCAAGATTGAGAACATTTTGATTTCAAAGTCCGGAGATA
TCAAGCTGATTGATTTTGGCCTCTCGAATCTGTTTGCGCCCAATTCCCAGCTCAAGACCT
TTTGCGGCTCGCTGTATTTTGCAGCCCCCGAGCTGCTGAAGGCACGACCGTACATTGGCC
CCGAGGTCGATGTGTGGTCGTTTGGCGTAGTTCTCTACGTCCTGGTGTGCGGCAAGGTCC
CCTTTGATGACAAGAACATGCCGCTACTGCACGCCAAAATCAAGCAGGGCAAGGTTGAGT
ATCCCAACTTTCTGAGCCCCGAGTGCAAGGACATTTTGGCACGTATGCTCGTGGTCAATC
CGCTACAGCGAGCTACGCTGGCGGAAATTCTGCAGCACCCATGGATGAGCAGGGGCTACG
AAGGCCCTCCCGACTCGTACATTCCATACAGAGAGCCTCTGACGCTGCCCCTGGACCCAC
AGGTTGTCCAGGAGATGAGCGGTTTCGAATTTGGCTCTGAGGCCGAAATCGCCCAGAATC
TGGCGGCGCTTCTTGAATCGCCAGAGTACATCTTAGCCTGCCACAACTGGTACAAGGCAC
ACGAGAGCTCGCCGTCTACCTCCCGGTTCTCGTTCGACCTGCTCAAACGAACGAGCGGTG
GCATGGGTGGTGGATCATCAGATTCCATTGATCTGACCGCCACCCCTATGAGTACTGCCG
ATCCCACAGCGGCCTACCACCCACTCATTAGCGTGTACTACCTGGTGCGTGAGCGATTGG
AACGGGACGCTCGAAGAGAGCAAGAGCGGGCTGGTGCCCCCTTTGTGGGCTATCGTCAGG
GCGCCGGGAGCGGCAGTGGCAGCGACGAGTTTGGTCATCATTCTGGCCACCATTCTGGTC
ATCAACATAGTCACAGCGGCCATGTGAGCATTCCAGCTCCTCCCACAGTGGTGCCTCCTC
CTGAGGCTGCTCACTCGCACCACACCCACACCCACAGTCAGTACTCGCCATTCCTGTCTG
GCCAGGGTCCCTCCCGAGCACGTGCTCGAACCCACGGTGCTTCCGACCTGCAGCCCCCGC
AGCAGCATGGTGCACATGGACAGCCCCAGGCGCCCCAGCGGGCGTATGACGCGCCTCACG
ACCACCACCAGGGTGGCCAACCGGGACCGCAGCCGCACCAGCTCGCATCCCCGCCTCCGC
TGTCGCCTCCGCCTCAGCAATACTCCTTCCCCGAAAAGAAGGAACCGAGTCTGGCATCAT
CGCTGCTCCGGCGGTTCTCATCTCGACGAAGCAAGCCCAGCGACAGCAGCAACCACGCGC
CAGAGCCTCCCTCGCCAGGCGGGCGACTCAAGGTACAGCAGCCAAGCTCTCCTCTTGGCA
GATCAACGTCTGTCAACGAGAAGCAGGCTCGAAAACCGGTTGGATACGGCACTCCTGGCA
CTCCCAGCAGCGCGAAGTTCTCTTCGGGGACACCCGGCAGTCCTCTGCGCAACGAGCGGT
CCATTCGGCATCTCCATCGGTGGATATGGCTGGTCTTGGGGTTCCTCACATGCCCAGCGC
ATCTTCTAACGCTTCTGGCTCTCATGTGACCCCCCACTCGTCTCAGGACGGCGTCGACGG
GCCTCCGCAGACTCCTCCTACGCGACCCACGGCAACTTTCGCGCCTGGTTCTGCCCAGCA
GCCGCCAACTACCACCCGAAAGCAGTACCACCCATCTGCGCGGGCGAAGTCAATGGGTCA
CGTGCGCAAAGAGTCAATCAACACCAAGGCGGCGGCTCCTCCTTCGGAGTCCATGCCTCC
TGTTCCTCAAGAGTTTGAGGATGACGTCGCCCCTGTGCAGTCGCGTCAGCACCACGTTAA
GATGGACGACGTGGATCTGGCAGACCACACGCCTACACCCTCGATCGACTATCCTAAGCA
GGTATTCCTCAAGGGTTTCTTTTCCGTGCAGTCGACGTCCACCAAGTCTTTGCCGTTTAT
TCGGTCTGACATTATCCGTGTACTGACTCAGCTGGGCGTGCGGTTCAAGGAGATCCGGGG
TGGATTCATGTGCATCCACGAGCCCAGCCTTGCGCGTGAAGAAGACCCTTCGCCCGGCCA
CCTGAGTCCACGGGTGGATACGGGCGATACATCGAGCTTGTCGCCTCCCGGCTCGCCTGC
GAATGCTCACTGGCGTAAGCTGTCGTTTAACGGAAGAAGACGGGATCATTCTGGTTCCGG
CCACTTTGATTTCTCCGACGACTTCTCTTGTGACTCGTTTGGCGGCTCTACGGAGCGGCA
TCATGCCCAGGGCGGAGGCAGTGATATGTTGGGCTACACAGCGACAAATTCGTCGGTGCG
AACGCCGCTGCAGTTTGAGATTTACATTGTCAAGGTTCCGATTCTGTCGCTGCATGGAGT
GCAGTTTAAGAAGATGACGGGTAACTCGTGGCAATATAAGAATCTGGCGGGTAAGATTTT
GGCTGAGCTGAAGTTATAGGTGGCGAAGACCGTAGGTCTTAGCAGACAAGAAGCTGTCAT
GAGTTGGAGAAGCAAGAAGCAGCTACAAGTAGTCTGCGGGATTGAGCAGCAAGAAACAAA
TAGCTGCAACTACAATACTCATTGGAGGTACATAATAATAGAGCACTTATCATAGACTGC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D22770g_CDS-001

Protein length: 983 aa.
Product: Serine/threonine protein kinase involved in regulation of exocytosis, putative

>YALI0D22770g_CDS-001 MTEPMTSPAPVPAPPPEKRMQKRRSIGEWDFVKTIGAGSMGQVKLAKSRVTGELCAVKVI
PKATAQHKRPPDEEAKESDISKDIRTVREAAIGKLLHHKYICEMREMYTMTNHYYMVFEY
VAGGQMLDYIISHGSLKERHARKFARAIGSALDYCHQNSIVHRDLKIENILISKSGDIKL
IDFGLSNLFAPNSQLKTFCGSLYFAAPELLKARPYIGPEVDVWSFGVVLYVLVCGKVPFD
DKNMPLLHAKIKQGKVEYPNFLSPECKDILARMLVVNPLQRATLAEILQHPWMSRGYEGP
PDSYIPYREPLTLPLDPQVVQEMSGFEFGSEAEIAQNLAALLESPEYILACHNWYKAHES
SPSTSRFSFDLLKRTSGGMGGGSSDSIDLTATPMSTADPTAAYHPLISVYYLVRERLERD
ARREQERAGAPFVGYRQGAGSGSGSDEFGHHSGHHSGHQHSHSGHVSIPAPPTVVPPPEA
AHSHHTHTHSQYSPFLSGQGPSRARARTHGASDLQPRSSMVHMDSPRRPSGRMTRLTTTT
RVANRDRSRTSSHPASAVASASAILLPRKEGTESGIIAAPAVLISTKQAQRQQQPRARAS
LARRATQGTAAKLSSWQINVCQREAGSKTGWIRHSWHSQQREVLFGDTRQSSAQRAVHSA
SPSVDMAGLGVPHMPSASSNASGSHVTPHSSQDGVDGPPQTPPTRPTATFAPGSAQQPPT
TTRKQYHPSARAKSMGHVRKESINTKAAAPPSESMPPVPQEFEDDVAPVQSRQHHVKMDD
VDLADHTPTPSIDYPKQVFLKGFFSVQSTSTKSLPFIRSDIIRVLTQLGVRFKEIRGGFM
CIHEPSLAREEDPSPGHLSPRVDTGDTSSLSPPGSPANAHWRKLSFNGRRRDHSGSGHFD
FSDDFSCDSFGGSTERHHAQGGGSDMLGYTATNSSVRTPLQFEIYIVKVPILSLHGVQFK
KMTGNSWQYKNLAGKILAELKL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG