YALI0D06171g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0D06171g

Location

Species Yarrowia lipolytica Positions 788616..789667
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1052 (nuc.)
Previous locus YALI0D06149g Next locus YALI0D06193g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D06171g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D06171gYALI0D06171g_mRNA-001YALI0D06171g_CDS-001

Nucleotide sequence

 

>YALI0D06171g
ATGTACTTCTTTGTGAAAAACACCGAGACGCCCGCCAGCACCGCCAACTCGACGATTCTC
AACCTCAATGACGAGCTCACGGTGCCAGACCCCAAGCTCGGCCTGGTTGCCACCTACGCC
AGAGACGGACACGGATACAGAAAAGAAGACGACACAGACTCAGAGGACGTGGACGCACTG
CCCAAAGACGAGGAGACGGGCTACGACATGCAGGCCGAGCTCGTGAGCCACCAGACCAGC
ACCATTGGCAACAAGACCGAAGCTGCACCCCCGTCCCTGTGGAGCTCTCTGGCACAGTTG
GCCCGAATGGCGTCGGGATCCACCGAAACACAGACCCCTTCCATCGCCCTGGAGATCGGG
TACCCCAACGTGGAGGACAAGAAGGGCTACAAGCTCAATCTGGGGCTGGTCAAGGTGGCT
CTCTATACCAAGAGTGCAAGTGGAGTGGGAAAGCCGCGATCCGGAAAGGCCGCGCGAGGA
CTGACCAGCCGGTCGCGTGATACAAGCCCTGTTCCCGGCTCCAACCGATGGGTGGTTCGA
ATGCCCCAGGCTGTGGACGCCACCCGTCTCAGAGTCTACCCCAACGGTCAGGTGACTGGC
AACTACGAGTACGCCCTCAAGGCGTTTGGTCTCAAGATTGGCGTCGGGCTCTACCGACCG
GTCAATGCATACCGATACAGAATCGATCGCTACGGAGTTCGACGGACCGAGTCTTCCTAA
TCTCAATCACAACACCAACACAAGGCGCCCCAGCGCGTGACTACGCTACGCTAACCCAAC
GGTCTACAAGTACAGTAGTAACATGACTAGTTGGTTCTAATCGCGTCGATCCGCGTTAGA
CCAAAATGCTGGACTAGTTACTGTTTGCAGTAGACTACACCGTTTGGGATGGCACTCTTT
CCTGTCTGGCTGATAGTGAGACACTTTGTCCCTGGAGGACATGGCCCTATAGTTCCATGT
GATGGTGGCGTTCACCAGAATTGGACCAAGGGCAAGTAACGATTTGACGACTATATAGAT
TAATTTATTGCATCACACACGGAACGACCATA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D06171g_CDS-001

Protein length: 240 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0D06171g_CDS-001 MYFFVKNTETPASTANSTILNLNDELTVPDPKLGLVATYARDGHGYRKEDDTDSEDVDAL
PKDEETGYDMQAELVSHQTSTIGNKTEAAPPSLWSSLAQLARMASGSTETQTPSIALEIG
YPNVEDKKGYKLNLGLVKVALYTKSASGVGKPRSGKAARGLTSRSRDTSPVPGSNRWVVR
MPQAVDATRLRVYPNGQVTGNYEYALKAFGLKIGVGLYRPVNAYRYRIDRYGVRRTESS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG