YALI0D06193g

Overview

Description weakly similar to uniprot|C5E228 Lachancea thermotolerans KLTH0H01672p
Locus type CDS
Locus tag YALI0D06193g

Location

Species Yarrowia lipolytica Positions 794324..796323
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 2000 (nuc.)
Previous locus YALI0D06171g Next locus YALI0D06215g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D06193g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D06193gYALI0D06193g_mRNA-001YALI0D06193g_CDS-001

Nucleotide sequence

 

>YALI0D06193g
ATGAGCTCGCCACCGCGCCCCAAACCCAAGACAAGCCGCGCCCGACCGCTTGTGCGGTCC
AAAACAGGCTGTCTGACATGCCGAAAACGAAAGAAAAAATGCGACGAGAACCACCCCATC
TGCAAGGGTTGCCAGCGTAACCAGCTCGAGTGCGTCTGGGCCGTACCCAGCACATCGATT
CCGGCCGTCAGCTACAAGCCGCTGGAGATGGACCTGGCGGAACAACAACAGACACAACCC
TCGATACGACACGGAGAACTTCCCCATGAAACTGTCCCATGGGGCAGCCCACCTCCTCAA
CAACAGCACCATCATCAACAGCATCAGCAACATCATCATCAACATCATCAGCAACAACAA
CAACAACAACAACATCTACATCAGCAGCAGCAGCAACAACAACAGCATCAGCAGCAGCAT
CAACAGCATCAGCAGCATCAGCAACAACAGGAAATCTTTCCACAGAACATTCAAATGCCG
ACATACATTTCTGACCCGGACAAACAAGAAGAAATGGACTCAAACAACGACCAAGACTCG
CCACCAACCCTACAATCGACGCCGCTGCAGTCCATTTTGACCATGTCACGTGATCCAACG
TCGGACATTACACGTGACATGTCCAAGCTGCTTAACTCCGCTTCTTCAGACACCTTCTAT
GGCTTCATGAAGTCGCATGAGAAACGCTTTCTGGAAGCAGTCATGCAGTTCAATCTCACA
GAGTCGCCGTATTCCAACTATGCTTTTCAATTTGCAGGTCTGGATCTGCAGCCCGACACA
GTGAAGCTGTATGATCGGTTTCTAACCCGCTTTGTGCCCGTCATCACTCCTCCCCATAGC
CATCCGGATCTTTCGTCCTGGGCAGTTTTAATTCCGCTAGTGTTCAAATCTCCGGAGATT
TTGCAGCTCTCGTTCGCCTGCGGAGCTCTGGATTTGGCCTGGCATGATCCAGATATGATG
AAGACGGTCCAGAAGCACTATCTGGCGGCAATTCGAGCCCTGCGAAACAAAATTGCGTCT
CGCGAAGTCAACGGCAGTGAAGACTGGCTGTTTTCAATCGTCCAGCTGCTGACCACGTTT
GAAAAGCATTTCGGAAGCCCAACTTCGGCGGTTGTACGTCATCTCAGTGGAGCTCAACGA
GTTCTCAGAGAACGCCAGCTCAAACGGGTCTACGATGGAGGCGAAATCTTTGCGCTCAAC
AAAAACGACCGTGTTCTGATGGAAGCGTTCCTCTACAACTACTCTGTGGCCATTCTCTTT
TGCAAGAAAAGCGATCTGGTTTACCTGAGTCCTCCCTCGGTGTTTGACGAGTTCAGACCG
TACCTTCAGGTGGCTCTTTACGAGACCCAAGTGTACTGGTCCAACAATCCCATTCTCGGA
GCTGGGTTCATTGTGTTTGAAATGTGTGCGAAGATCAGCTGGATCGCCCGCAAGGAAGTA
CTCACAATCGAGGACTCGCAGAATATCAAGTCGTACATCCGAGCCCTCGAAATATGGTCC
GTCCCAGACATTCAAAAGACACACATGACCGATGAGCTCGAGTACCACAGCTTCATGCAG
CACATGTACGCCTCCCGGGTGATGCGACAGGCCGTCATTCTGCTAGCCAAGAAACTGCTC
AACCCAGACCTCCAGGAAACATCAGAGGAGGTTGTAGGACACGTGACCGCGGCCGTTGAG
GAGCTTAAGTCCATCGAGCTCGGCTCCTACGTGTCCTGTATCATTGGCTGGGCCATGGCC
ATCGCCGGATGTGCCGCCACGGAAAAAACACACCGAGAGCTGTTCAAGTTCCGCGTCGAA
AAGTTTGGTGAAAACTCCAGAGCCGCCATCTTCAGACAAGTTATGAAGCTTTATGGGCTG
GCCTGGGGCCTGGGAGAGGACCAGAAGGAGCTGGGACTGGACATTATTTATGAGAGAGAC
GTGCTGGAGAGTATGGCTTTGTAGGATGGCCACCATGTATTGTACTTTAACTAATGTATT
TATTCACTATTGTACTGACA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D06193g_CDS-001

Protein length: 648 aa.
Product: Conserved hypothetical protein

>YALI0D06193g_CDS-001 MSSPPRPKPKTSRARPLVRSKTGCLTCRKRKKKCDENHPICKGCQRNQLECVWAVPSTSI
PAVSYKPLEMDLAEQQQTQPSIRHGELPHETVPWGSPPPQQQHHHQQHQQHHHQHHQQQQ
QQQQHLHQQQQQQQQHQQQHQQHQQHQQQQEIFPQNIQMPTYISDPDKQEEMDSNNDQDS
PPTLQSTPLQSILTMSRDPTSDITRDMSKLLNSASSDTFYGFMKSHEKRFLEAVMQFNLT
ESPYSNYAFQFAGLDLQPDTVKLYDRFLTRFVPVITPPHSHPDLSSWAVLIPLVFKSPEI
LQLSFACGALDLAWHDPDMMKTVQKHYLAAIRALRNKIASREVNGSEDWLFSIVQLLTTF
EKHFGSPTSAVVRHLSGAQRVLRERQLKRVYDGGEIFALNKNDRVLMEAFLYNYSVAILF
CKKSDLVYLSPPSVFDEFRPYLQVALYETQVYWSNNPILGAGFIVFEMCAKISWIARKEV
LTIEDSQNIKSYIRALEIWSVPDIQKTHMTDELEYHSFMQHMYASRVMRQAVILLAKKLL
NPDLQETSEEVVGHVTAAVEELKSIELGSYVSCIIGWAMAIAGCAATEKTHRELFKFRVE
KFGENSRAAIFRQVMKLYGLAWGLGEDQKELGLDIIYERDVLESMAL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG