YALI0D06149g

Overview

Description similar to uniprot|P47032 Saccharomyces cerevisiae YJL079C (ohnolog of YKR013W) PRY1 protein precursor (Pathogen related in Sc 1)
Locus type CDS
Locus tag YALI0D06149g

Location

Species Yarrowia lipolytica Positions 782897..783929
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1033 (nuc.)
Previous locus YALI0D06105r Next locus YALI0D06171g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D06149g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D06149gYALI0D06149g_mRNA-001YALI0D06149g_CDS-001

Nucleotide sequence

 

>YALI0D06149g
ATGAAGCTCTCCATCGTTCTCGTGGCTCTGGCAGCCGTCTCCTCCGCCCAGCCCATCGTC
GGGGTCTACGACAAGCGAGACTCTGCCGAGACAGTCCAATACATTCATTTTGCCGACGAC
GCCCACGTTGAGACCCGCGACCTCACCAAACGAAGCGTCTTTTCCGACTGGTGGGACAGC
CTCTGGAAACCTGCCTCCAACAGCGACAGCAACTCGTCATCTTCGTCGTCGTCGTCGTCA
TCGTCATCGTCATCGTCGTCGTCGTCTTCTACCGACGATACCCTGAACAGTATCTTCTCC
TCCTTCTCTTCCTGGCTCAACAGCCTGTTTGACGACGCTGGCGGATCCGGCTCTGGATCG
TCGGGCTCTGGATCTTCCGGCTCTGGATCTTCCGGCTCTGGATCGTCTTCTGCCCCCTCC
GCCTCTCCCTCGGTCGCTCCTCCTGTTTCGCCTTCTCCTGCTCCCAAGAAACCCGCTCCA
ACCCCTGGCCCCCCCACTCCCTCTCAGGGCGCGTCATCTCTGGACCTCAACTCCTGGGAC
CAGATCATGCTGGTATCGCAGAACGGCTACCGGGCTGAGCACGGAGTGGGAGCGTTCACA
TGGAACTCCACTCTGGCCAAGTACGCCTCCGACTACCTCAAAAAGGCCCAGTGCAACTTT
GAGCACTCCCATGGCCCTTACGGCGAGAACCTGGCCATTGGCTACCCTACTCCCCAGGCA
GCTGTCGACGCCTGGTACAACGAGTACAAGGACTACAACTACGCCCAGGGCGACTTCTCC
GAGGCCACCGGACACTTCACCCAGTTGGTCTGGAAGGGCTCCACCCAGGTGGGATGTGCC
CAGAGCTCGTGCGGAGGACGGGGCTCTTATGTTGTTTGCGAGTACTACCCTCGAGGTAAC
GTCATTGGATGGTTCCAACAGAACGTTTTCAACTAGACGGACCCGTCGCAACCGTCACTC
ACATTCAGATTCCTAGTCGCTGGCGACGTACAGTAATTCTTGTAAATTAATTGATTCACT
AATGATTTGAGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D06149g_CDS-001

Protein length: 312 aa.
Product: Sterol binding protein involved in the export of acetylated sterols, putative

>YALI0D06149g_CDS-001 MKLSIVLVALAAVSSAQPIVGVYDKRDSAETVQYIHFADDAHVETRDLTKRSVFSDWWDS
LWKPASNSDSNSSSSSSSSSSSSSSSSSSSTDDTLNSIFSSFSSWLNSLFDDAGGSGSGS
SGSGSSGSGSSGSGSSSAPSASPSVAPPVSPSPAPKKPAPTPGPPTPSQGASSLDLNSWD
QIMLVSQNGYRAEHGVGAFTWNSTLAKYASDYLKKAQCNFEHSHGPYGENLAIGYPTPQA
AVDAWYNEYKDYNYAQGDFSEATGHFTQLVWKGSTQVGCAQSSCGGRGSYVVCEYYPRGN
VIGWFQQNVFN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG