YALI0D04334g

Overview

Description similar to uniprot|P06242 Saccharomyces cerevisiae YDL108w KIN28 cyclin-dependent ser/thr protein kinase
Locus type CDS
Locus tag YALI0D04334g

Location

Species Yarrowia lipolytica Positions 538633..539636
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1004 (nuc.)
Previous locus YALI0D04312g Next locus YALI0D04356g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D04334g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D04334gYALI0D04334g_mRNA-001YALI0D04334g_CDS-001

Nucleotide sequence

 

>YALI0D04334g
ATGAACGACGCCGTCATGGCAAAATACACCAAGGACAAAAAGGTCGGAGAAGGAACTTTC
GCCGTGGTGTACGTGGGCAAACAGGTGAAGACAGATCGGAAAATCGCCATTAAGCAAATC
AAAGAAGGCGAGTTCAAGGACGGAGTGGACATGTCGGCCATCAGAGAAATCAAGTTTCTG
CAGGAGATTCGCCACGCCAACGTTATCGAGCTCATTGACGTGTTCACAGCCGGACCCAGA
CTGTCCATGGTCTTGGAGTTCCTGCCTACCGATCTGGAAGGACTCATCAAAGATACAAAG
ATTCTGTTCCGTCTGGGAGATGTAAAGGCCTGGATGCTCATGGCCACTCGTGGACTGCAC
CACTGTCATCGTCTGCAGATTCTACACCGAGATCTCAAACCCAATAACTTGTTGATCTCG
CCCACTGGAGAACTGAAGATTGCCGATTTCGGTCTGGCTCGTCAGATGCCCAACCCCAAG
GACAAAATGACCCCCACTGTGGTTACTCGATGGTACCGAGCACCGGAGTTGCTGTTTGGA
GCTCGATATTACACCCCTGCGGTTGACGTATGGTCGTTAGGACTGATTTTTGCAGAACTC
ATGCTCAGATTACCGTACTGTCCTGGAGAAGACGACATAGACCAGATCGACAAGACTTTC
CGGGCGTTTGGTACACCGACAGAGGAGGAGTGGCCTGGATTGACATCTCTACCTGCTTAC
CCCAAAACTGTCAACAAGTACCCTCATCCCTCAGTGCAGGAGCTGAAGATGCGGTTTTCG
GCAGCTACGGAAAATGGTCTGGAGCTGTTCCAGGCCATGACGGAACTCAACCCGGCAGAT
CGAGTGTCCTGCGAGGAAGCTCTTACAGCAGACTATTTTACTGAGTTCCCCCGACCTACA
AAACTGGCAGAGCTCCCAGGCCGAACAGAGTAATCATAGCATGTATATAACGAACTGAGA
CAGACATCATTATGTCTCTTTTGAACTAAAACTTGTTATTCGTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D04334g_CDS-001

Protein length: 311 aa.
Product: Serine/threonine protein kinase, subunit of transcription factor TFIIH, putative

>YALI0D04334g_CDS-001 MNDAVMAKYTKDKKVGEGTFAVVYVGKQVKTDRKIAIKQIKEGEFKDGVDMSAIREIKFL
QEIRHANVIELIDVFTAGPRLSMVLEFLPTDLEGLIKDTKILFRLGDVKAWMLMATRGLH
HCHRLQILHRDLKPNNLLISPTGELKIADFGLARQMPNPKDKMTPTVVTRWYRAPELLFG
ARYYTPAVDVWSLGLIFAELMLRLPYCPGEDDIDQIDKTFRAFGTPTEEEWPGLTSLPAY
PKTVNKYPHPSVQELKMRFSAATENGLELFQAMTELNPADRVSCEEALTADYFTEFPRPT
KLAELPGRTE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG