YALI0D04312g

Overview

Description similar to uniprot|C4R320 Komagataella pastoris hypothetical protein
Locus type CDS
Locus tag YALI0D04312g

Location

Species Yarrowia lipolytica Positions 537340..538712
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1373 (nuc.)
Previous locus YALI0D04290g Next locus YALI0D04334g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D04312g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D04312gYALI0D04312g_mRNA-001YALI0D04312g_CDS-001

Nucleotide sequence

 

>YALI0D04312g
ATGATCTCGAGACAGCTCATACGTCACGTGAATGGAGGGGCCGCCAGATTCACCCCCTCT
TTACACATAAAGAGCTTTTCTTCCACCCCGGCCCGTTCAGCCGACTTTTCGCACACCATC
ATTGGAGGAGGAGTGGTGGGTTTGGCCGTGGCAGCAAGTCTGGCCAAACAGAGCCCAAGC
AACTCGGTTCTGCTGGTGGAGCGAAACCCGGCAGTAGGCATGGAAACTTCGAGCCGAAAC
TCCGAGGTCATTCACGCTGGCATCTATTATCCGCCAGAATCGCTGCGTACAGAGTTGTGT
ATTCGAGGCAAGGAGCTCATTTACAGCACTGCTCAGGAGGCCGGAGTTGATCTTAAGAAC
TGTGGCAAATGGATTGTGGCGCAAAATGACGACGAATTGAGCTACTTGGAGAAAATGCAT
GAGCGGGTCTCGGCTTTGGGGGTGCCTATCGAGTGGGTATCAGATGCCGACAGAAAGAGG
CTTGAACCAGACGTCAAGGCAACCGCGGGAGCTCTCAATTCACCCACCACGGGCATCATT
TCGGCTCACTCGCTCATGCTATATTTAGAGGGCGAATTTGAAAATAATGGAGGCACTATT
GCGTTGCTATCTGATGTCACTGGTCTGGAGTACAAGAACAACGAGTACCTTTTGACAGTG
GAAAGTGAAGGTGAAAAGTCGGAAATTACCTCCGCCGCAGTAGTCAACTCTGCCGGCCTT
GCGGCGCCCAAAATCTCAAACATGCTGCTTCCCGAGGACCGTCATGTCACTGCTTACTAC
GCCAAAGGTAACTACTTCTCATATTCTGCCTCCAAGCCCCATACTAACAGACTCGTCTAC
CCCTGTCCCAGCTCTCAGGCTTCTCTCGGCACGCATTTGACGCTTGATCTTGGTGGCAGA
ATCAAGTTTGGACCAGATCTGGAATGGGTGGACTCACCAAATGATCTCCAGGTCAACGGA
TCTAGGCTTGATGAGGTCTATGAGGCTGTCACGACATATCTTCCGACCGTGGAGAGGCAG
CATTTGCAGGCAGACTATGCTGGTATTCGGCCTAAAATCACTGGCCCTGACCAAAAGGGC
GTTTTCCAAGACTTTGTCATTCGTCAGGAGGACGATTTCCCTGGCTTCATCAACCTACTC
AACATTGAGTCCCCTGGCCTCACCTCTTCCATGGCCATTGGAGAGAAGGTTGCCAAGATG
GTGTAACGGTAACACTAGAGACATTTAGACTGTATTACTAGAGAGAGAACGACCCTCTAT
GATTACTGAGCACTACTCTTTTGGTATGCTGATCACGAATAACAAGTTTTAGTTCAAAAG
AGACATAATGATGTCTGTCTCAGTTCGTTATATACATGCTATGATTACTCTGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D04312g_CDS-001

Protein length: 402 aa.
Product: Conserved hypothetical protein

>YALI0D04312g_CDS-001 MISRQLIRHVNGGAARFTPSLHIKSFSSTPARSADFSHTIIGGGVVGLAVAASLAKQSPS
NSVLLVERNPAVGMETSSRNSEVIHAGIYYPPESLRTELCIRGKELIYSTAQEAGVDLKN
CGKWIVAQNDDELSYLEKMHERVSALGVPIEWVSDADRKRLEPDVKATAGALNSPTTGII
SAHSLMLYLEGEFENNGGTIALLSDVTGLEYKNNEYLLTVESEGEKSEITSAAVVNSAGL
AAPKISNMLLPEDRHVTAYYAKGNYFSYSASKPHTNRLVYPCPSSQASLGTHLTLDLGGR
IKFGPDLEWVDSPNDLQVNGSRLDEVYEAVTTYLPTVERQHLQADYAGIRPKITGPDQKG
VFQDFVIRQEDDFPGFINLLNIESPGLTSSMAIGEKVAKMV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG