YALI0D04356g

Overview

Description similar to uniprot|C5MDE4 Candida tropicalis conserved hypothetical protein
Locus type CDS
Locus tag YALI0D04356g

Location

Species Yarrowia lipolytica Positions 539953..541197
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1245 (nuc.)
Previous locus YALI0D04334g Next locus YALI0D04367r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D04356g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D04356gYALI0D04356g_mRNA-001YALI0D04356g_CDS-001

Nucleotide sequence

 

>YALI0D04356g
ATGATTGAATATCTCGCTCTGGCTGCCTTTTTGGCAGTTGTCTCTGTCCTAGCATGGTCT
CCCTCTAGACGCAGAACCGTGGTCCGAAGACTGTCCCACAACCTAGAGAAGGGCACCAAT
CCTCTCTCTGCTCACTTGTCCGAAAAGACCTCGACTCTCGGAGTTGAGGAGCCCTGCCCG
TTGCCTACTCCTCTGGACATCACTCCTGAACAGGTTGCTACCTATGATGATAGACCTTGG
AGACCCTTCCGTTGGCCTTATCACCAAACCATGTCGATTTTCAAGCTGGACATCAACCAC
TGGATCGACATGGATAAATGGTATGTGCGCTATCTGCAGGAAAAGCAGCGGCTCAACGAA
AAGAACGGTACTGCAGCTTGTGACTGGCTTCCAGAGTCAGAACTGGCGTGCCAGGAGCTG
CTGGACACAGTCGTCGAACATCTCGTACATCGATACCCAAAGCTGTTCACTATGACTGGC
ATATCGACAGTTGTCAATCATGTCACCAAAGAAACCATCGATCTCAAAGCCGATCATCCT
CTCCACTTGCTTTCCAAGCTCACCAAAGAAGACTACTACGTTGTCCAGAAACGGGATGAC
GGACGTCATTATCTGGTGGCTGCTGAAGTGCCCTTCCCCGGAGGCTCCTTTTCCATCCAG
ACAAAGATCGGCAAGCATCTCAATGTCATTCATGAGCCTGTTCCCTACTACAAGGAGAAA
CTCATGCCCTCTATGGAACGGTACTTTGGACGAATGAAGGTCAACGAACCAGTTGAGAGA
GCCTCCTGGTATGTCTCCTGGGACTACAACCTCGATGTTTCTCATGTTTATAACGATAAG
CACACCGAAGAAACCGTCAGACAGGTGCCCTATGAGAACTTTGTGGTCCGAGTGGAACGT
CAAACTCTACGAAGACTACCAAAGTCCAGAGCCATCATTTTCACGAACCACCCAGTCTAC
TACAAGATCTGTGACATGAAGGATGAGCCCTTTGTGCCCTCCATCATCAAAAAGGTCATG
TTCGAGGCCCCCGAGGATATCATCAAGTACAAGAACTATCCAATGATCCGAGACTATCTG
GTGGTTTACTTGGATCAACTGATTGAACGACAAATTGAGATGGGCATCATTAAACGAGAT
GATCCTATTAGAACCTCTGCAAACTATCCCTTCGCTCATTTCATCACCAAGCCATTTGTC
AACTCTTCTGAACGAGTTGATGTTACCAACAAGCCAGAGGCGTAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D04356g_CDS-001

Protein length: 415 aa.
Product: Conserved hypothetical protein

>YALI0D04356g_CDS-001 MIEYLALAAFLAVVSVLAWSPSRRRTVVRRLSHNLEKGTNPLSAHLSEKTSTLGVEEPCP
LPTPLDITPEQVATYDDRPWRPFRWPYHQTMSIFKLDINHWIDMDKWYVRYLQEKQRLNE
KNGTAACDWLPESELACQELLDTVVEHLVHRYPKLFTMTGISTVVNHVTKETIDLKADHP
LHLLSKLTKEDYYVVQKRDDGRHYLVAAEVPFPGGSFSIQTKIGKHLNVIHEPVPYYKEK
LMPSMERYFGRMKVNEPVERASWYVSWDYNLDVSHVYNDKHTEETVRQVPYENFVVRVER
QTLRRLPKSRAIIFTNHPVYYKICDMKDEPFVPSIIKKVMFEAPEDIIKYKNYPMIRDYL
VVYLDQLIERQIEMGIIKRDDPIRTSANYPFAHFITKPFVNSSERVDVTNKPEA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG