YALI0C04389g

Overview

Description some similarities with uniprot|Q6CBG3 Yarrowia lipolytica YALI0C19107g
Locus type CDS
Locus tag YALI0C04389g

Location

Species Yarrowia lipolytica Positions 585437..585958
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 522 (nuc.)
Previous locus YALI0C04367g Next locus YALI0C04411g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C04389g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C04389gYALI0C04389g_mRNA-001YALI0C04389g_CDS-001

Nucleotide sequence

 

>YALI0C04389g
ATGAACAAGTTCGCCACTCTCGCCGCTCTCGTCGTTGTTTTCTTCGCCCTGTTCACCCAG
GCCGCTGTCATTGAGAAGCGACTGCTGGGCCACAAGATCGACCCCAAGTACCCCCTCAAG
TTCGACATTTTCTCCAACTCCAACCACTGCAACGGTGCCCGAATCAAGTCCATCACCATC
AAGACCGGTGCCGCCGAGAAGTGCTACAAGACCGAGCGATTCAACTCCGTCTACGTTGCC
CCCTCCAACGACTGTGAGATCCGAGTCTTCAAGGACCACAAGTGCCGAGGCGACCCCGAC
TACATTCTCGAGACCCAGGGAGGCAACGCCACCTGTTTCTCCGACACCAAGAACGCCCGA
TCCGTCATGGCTGTCTGCCAGGAGTAAGTCCACAACTCAAGCTCTCAAATTTCATGCCTA
CTTGTCGATAGATGATGGCATCTAGGCCTTTTAATATTAATGTCCATGGTAGCTTGGGGG
ACAAGTAGCGATAGACACTGTAGCAAACGATACCTCAAGTAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C04389g_CDS-001

Protein length: 129 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0C04389g_CDS-001 MNKFATLAALVVVFFALFTQAAVIEKRLLGHKIDPKYPLKFDIFSNSNHCNGARIKSITI
KTGAAEKCYKTERFNSVYVAPSNDCEIRVFKDHKCRGDPDYILETQGGNATCFSDTKNAR
SVMAVCQE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG