YALI0C04411g

Overview

Description similar to uniprot|P38925 Saccharomyces cerevisiae YOL122C SMF1 Divalent metal ion transporter with a broad specificity for di-valent and tri-valent metals
Locus type CDS
Locus tag YALI0C04411g

Location

Species Yarrowia lipolytica Positions 588612..590421
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 1810 (nuc.)
Previous locus YALI0C04389g Next locus YALI0C04433g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C04411g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C04411gYALI0C04411g_mRNA-001YALI0C04411g_CDS-001

Nucleotide sequence

 

>YALI0C04411g
ATGAATTGTCCGACCAAAGACACCGACAAGACCTGGGCTCGGCCCGGGTACAACCAGAAC
CCCCGACGATTCGACTCCAATCTCATTTCTAACGTGTTTTTCAGCTCTGGTAACGTGCCC
AAACCTGCGACAGGTTGCGATGACGAAGACGGAGGGAAAGGGATACCCTTGGACGCGATT
GAGGAACGCAGTGTCAATGAGAACGGCAGTGGAGGATCTGAGGGGCCCAAGGACCAAGTG
ATTAATCACGCGTGTCCTTCCGCTCCTCCCCCTCCCCCCCTTGCTCCTACTGTGCTTCAG
ACCATCCAGATGGCGTTTCTGAAATACGTGCGTTTCCTGGGTCCAGGTCTCATGGTTTCT
GTGGCGTACATGGATCCTGGAAACTATTCCACGGCCGTTGCTGGTGGTGCCAACCATCAA
TTCGCCCTACTCTTTGTCATCTTGCTGTCTTCTATCATTGCTCTTGTGCTCCAGTCTCTG
GCCATCAAGCTGGGATCCGTCACCGGTATGGACCTGGCAAGATGTTGCCGAGAATACCTA
CCCAAATGGATGTCAATAACTCTTTACATTTTTGCAGAGATTGCCATTGTTGCTACTGAT
ATCGCTGAGGTCATTGGTACTGCCATTGCTCTAGATATCCTGCTTCACATTCCCCTGATC
GCAGGGGTCTGTATGACCATTGTTGATGTTCTGATCGTGTTGTTTGCCTACAGACCTGGT
GGAGGAATGCGAGTGGTCCGGTTCTTTGAGTATGCTGTTGCTGCTCTCGTTCTGGGTGTC
TCCATCTGCTTTATTATCCTTCTCTGTCGAATCCCCCACCAGTCAGTCCGAAAGATCTTC
CGCGGGTTTGCTCCCAGTCGAGCACTGATTCAAGGAACGGGTATTGTTGACTCAGCAGGT
ATTTTGGGAGCTACAGTCATGCCTCATTCTCTGTTCCTTGGCTCAGGACTCGTCCAGCCT
CGCCTTCGAGAATGGGACGTGGCTAACGGAACTGCCCCTGCTCCAGACAGCTCAAAGGAC
TCCGAAGAAGAGTACTTTGCCTATAAGCCAACAATCGGGGCCATTAAGTACTGTCTAAAG
TACTCCATCATCGAGCTGGTAACCACTCTGTTCACCCTGGCTCTGTTTGTCAACTCGGCT
ATCCTCATTGTGAGTGGAGCCACTCTGTACGGAAACAGTGATGCTTCCACAGCCGATCTG
TACGGAATCCACTCACTTCTCAGACAGTACATTTCCAAGGGCGCAGGCACCATTTTCATG
TTGGCTCTCCTTTTGTCTGGTCAGTCAGCAGGCATCGTGTGCACCATTGCTGGCCAAATG
GTGTCTGAGGGCTTTCTGAGATGGACAATTCGACCTTGGCTAAGACGAATAATCACTAGA
TCCATCGCGGTCGTTCCCTGTGTGGTTGTAGCTGCTGCTGTCGGCAAGGAGGGTCTCAAT
TCAGCCCTCAACTACTCCCAGGTGGCTCTGACCCTGCTGCTCCCATTCCTCACCTTCCCT
CTCATCTACTTTACAAACTCCAAAAAGCTCATGAAGGTCGCCAGAGATCCCAGTGTGACA
GCCGACGACGCTTCCGAGACCACAGTTCTAGCCCAATGGCTCGACTACTCCAACCACTGG
GTGTTGGCCATTGTGTGCTGGGCTCTTTGGCTCTTCATTGCCATTCTCAACGTCTACCTG
ATTGTCCAGCTGGGTATGGGTAATTACTAGGGGCTTTGCCGCACTTATATCAACCAGTAT
ATAAACCATGATTCAAGAGCAGGAACGCCCGAATTGTGTCTACTAGAATACCATTACCAC
TTAACTCTGC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C04411g_CDS-001

Protein length: 570 aa.
Product: Divalent metal ion transporter, putative

>YALI0C04411g_CDS-001 MNCPTKDTDKTWARPGYNQNPRRFDSNLISNVFFSSGNVPKPATGCDDEDGGKGIPLDAI
EERSVNENGSGGSEGPKDQVINHACPSAPPPPPLAPTVLQTIQMAFLKYVRFLGPGLMVS
VAYMDPGNYSTAVAGGANHQFALLFVILLSSIIALVLQSLAIKLGSVTGMDLARCCREYL
PKWMSITLYIFAEIAIVATDIAEVIGTAIALDILLHIPLIAGVCMTIVDVLIVLFAYRPG
GGMRVVRFFEYAVAALVLGVSICFIILLCRIPHQSVRKIFRGFAPSRALIQGTGIVDSAG
ILGATVMPHSLFLGSGLVQPRLREWDVANGTAPAPDSSKDSEEEYFAYKPTIGAIKYCLK
YSIIELVTTLFTLALFVNSAILIVSGATLYGNSDASTADLYGIHSLLRQYISKGAGTIFM
LALLLSGQSAGIVCTIAGQMVSEGFLRWTIRPWLRRIITRSIAVVPCVVVAAAVGKEGLN
SALNYSQVALTLLLPFLTFPLIYFTNSKKLMKVARDPSVTADDASETTVLAQWLDYSNHW
VLAIVCWALWLFIAILNVYLIVQLGMGNY*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG