YALI0C04136g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0C04136g

Location

Species Yarrowia lipolytica Positions 543471..550972
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 7502 (nuc.)
Previous locus YALI0C04114g Next locus YALI0C04158g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C04136g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C04136gYALI0C04136g_mRNA-001YALI0C04136g_CDS-001

Nucleotide sequence

 

>YALI0C04136g
ATGAAGATCTCTCTTCTGCTCTCCGTTTCAGGAGCCCTACTTGCCGCTGCTGGTCCAGTG
CAGTACAAGGCGTGCCTTCCTGCCTCCTCTCTCTCAGCTGAAGCCTGTGTGTCCAGCTGC
GATGACTTTTTGACCCTGGGATCCGACCCCGAACAAGTGAGTATTCATTTCCGACAGGCC
ACCCCTGCCCCGCTGCCAGCACTGTGCCGACATTAGGCTTTTTCATCTTGGACAAATATT
TTTCTGGGCTGCATTTTACGAGCAGCGACCCTAAAGGTTCAATTCTGCGCGCACAACTGC
TCTTTGCAAACTTTGCCAAGCCTAATGCGATAGATTATGCATTGCTGCAAAAGAACATCT
TCGTGCAGATTGCCAAAGGTCCCAGCTGCACTGCACTGCACATATGCACCTCAAACCACA
CACACAAACAAGGACAGATTACTAACCCAAAATAGTGCCTGCAGTGCCTGTCTGTGTTTG
ATCTCCCCGACCAAAAATGGGACGTTTACGACCGGCTCGAGGAGCTGGGACTCGCCCCGA
CACCCCAAATCACAGTCTGCGGCGCCGAAAACCCCCAGATCACCCCCGCCCCCGCCCCCG
TTCCCGTTCCCGTGCTCGAAAAACGAGCCCCCATTGTGACCGTTTCGTGTAGCACCGCCA
CCACTTCCAGAGACTCGTGTCTCACCACCTGCGGCAACATCATCAACCAGATTGCCCTTT
GTCTCGGAGTGAGAAGCTGTATCTGTGACCGAATTGTGACTTTTAACAACAATGTCGAAA
CCTGTCTCGAATGTATCACCAGATTCGACTTTGGTCCCGTCTTCGACATCCCTGGTAGAT
TTTTGCAATTCCTGGCTCAGTGTGACAGAGCAACTACTGTTCCACCCCCAGTTTGTGTTA
CTCGAACAATCGATACCAAGGTTTCCTGCGAACCAGACACCTTTACTTCAACTTGTTCTG
TGGCCAACAACGACAACATGAGTCTTCTGAAGTGTACCGAGACTTGTACCAGTATCATCA
CTTCCATCGGTCTGTGTCTGGGCTTCCGATCTTGTATCTGTAACAGACTGGCTGCAGTAA
CTACCGCTGTCGCGCAGTGTATCCAATGTGTCTCGATTTTCGATCTCAGTGGAATCCCCT
TTCTTGCAGCCAACTTCCTCAACGTGCTGGGTCAGTGTGGAGTGAACTCCCAAGCTCTCA
CTAGCTGCTCCCCCCTCACCATTTCTGGTAAATGTGTGACCATTTCTTCTACTCTGCCTC
CTGCTCCCGTGACCTCAGCCGCAGTGACCACCAGCTCCAAGCCCCCCGCTCCCGCTTCAA
CATCTTCCCCTGTGGTCTCCAGCACTAATCCCGCTTCCAGCTCGCCTGTTGTGGTGCCCA
GTTCCACCAACCCTGTTGTTTCTAGCTCGCCTGTGGTTGTCCCAAGCTCTTCCGCTCCTG
CTTCAAGCTCGTCTTCCAGCTCGCCTGTTGTGGTGCCCAGTTCCACCAACCCTGTTGTTT
CTAGCTCGCCTGTGGTTGTCCCAAGCTCTTCCGCTCCTGCTTCAAGCTCGTCTTCTAGCT
CGCTTGTGATTGTCCCCAGTTCTTCCACTCCTGCTTCAAGCTCGCCTGTGGTTGTCCCTA
GCTCCTCGGTTGTTGTTTCGAGCTCTACTCCTGCAATCCCCACTTCTTCTAGTGCTCCAG
TGGTTGTCCCCACCCCCTCTTCATCTGCTGGTATCACTCCTCCCCCTGTGTCATCCTCTC
GGGCTGCTGTGTCTACTTTCACCTCTTGTAGCACAGTCACCCAGTCCAGGGATAGCTGTG
TCAAGACTTGTGGTGATATCATTCGAGAGATTGCTCTCTGTGTTGGAGTTCAGCAGTGTA
TTTGTGACAGAATTGCGACTTTCAACAACAACGTCGAGGAATGTTTGTCCTGTATCACGT
ACATCGACTTCGGTGGTCTGTTCAACTTCCCAGATCAGCTTCTGAGATTCATTGGCGGCT
GTGGACGACCCACTACTGCCTCCGATGTTTGTGTTACCAAGACAATCGACCCCGCCGTGT
CCTGTGAGCCTGATGTGACTTCTTCCACCTGCTCAGTCGGTAACAACAAGGATCTGAGCT
TCACCCAGTGCTTCAATACTTGCACAAGCATTGTGAGCTCCATTGGTCTGTGTCTCGGAA
TTCGAAGCTGCATCTGTGATCGTATGGCCAGCACTGCGGAAGCAGTTGGTGACTGTATCC
AGTGTGTGAGTCTGTTTGATTTGGGTAACATCCCTTTCCTCGGTGCCAACTTCCTTAACT
GGCTTGGTAACTGTGGTATCAACTCTCAGGCCACTTCTCAATGCAGCTACCAGACCATTG
CTGGAGAGTGTTCCACTCTGAGTAGCTCTGTCATTATCACCTCTGCTGCTCAGTCAACCT
CCTCTAGTGCATCGATCCCTACCTCATCGGCTCTGACTGGTGTGTCTTCCACCTCTTCCA
CAGACACAGGATTGTCGTCTGCTACTTCGTCCTCGGCATCTAGCTCCGATGTTTCATCCA
GCGCCTCTGACTCTGCAGTGACTTCCACTGAATCTGGTGCCTCTTCCACAGCTACTGATT
CTGTTGCGTCGTCAGGAGCTTCCAGTTCCGATGTGTCTTCCACTGCTTTTGGATCGAGCT
CCTCCATCACTGCCTCTGACTCGGGTTCGTTGTCACCTTCTCCCTCATCTACTGAGAGTT
CCGACGCATCCACCCACATGTCCACAGCGTCCTCCACCGTTACTGGCTCCGACACGACCT
CCTCTGCCTCCAGCTCCGATGTGTCTTCCACTGCTTTTGGCTCAAGCTCTTCTTCCACTA
CTTCTGATTCTTCGCTCTCATCTACAGAGACGTCGGAGATATCCACCATCACATCTGCTC
CTTCCACTTCCACTGGCCCTGTCGCTACTACCATCACTTCTTGTAGCACAGTCACTCAGT
CCAGGGATAGCTGCATCAAGACCTGTGGCGACATCATCCGAGAGATTGCTCTGTGTGTTG
GAGTTCAGCAGTGTATCTGTGACAGAATCTTGACTTTCAACAACAACGTCGAGGAGTGTT
TGTCCTGTATCACCTACATTGACTTTGGTGGTCTTTTCAACTTCCCTGATCAGCTGCTGA
CCTTCCTTGGTGGCTGTGGACGACCCACTACTGCCTCCGAGGTGTGTGTTACAAAGACCA
TTGATCCTTCCATCTCGTGTGAGCCCGACGTCACTTCTTCCACCTGTTCCGTTTCCAACC
CTCGAGATTTTACTATCTCTCAGTGTCTGAAGACTTGTGGCGATATCGTTTCTTCCATTG
GTCTTTGTCTTGGAGTTCGAAGCTGCATTTGTGATCGTATGGAAAACACTGCTCAGCTTG
TTGGAGACTGTATCCAGTGTGTGAGTTTGTTTGATCTTGGAAGCATTCCCTTCCTTGGCG
CCAACTTCCTCAACTGGCTTGGTCAATGTGGTGTCAACTCTCAGGCCGCCAGTAACTGTG
TGTACCAGACCATCACTGGTGAGTGTCACACTCTCAGCAGCTCTGTTGTCATCACCACTG
CCGCTCAGTCCACCACCTCCTCCAGCGCTGTCGTTGTTCCTTCGTCGTCGGTCCCGACCA
TTGTGTCATCCACTGCTACCACTGACATCGTGTCGCCTAGCAGTAGCACTGCTGATGGAT
CCACTTCCAGCGATGGTATCACTTCCGCCACTTCTGAGTCGTCTTCCACAATCACTGCTA
CAATCAGTGACAGCGGTAGCACCACACAATTGTCGTCGTCTGGCATTTCATCGGATATCA
GTGGTTCTGTGTCTCAAACGTCTGAGTCGTCTGCAGGTACATCCACCGTGGAAACCTTAA
CATCTGACTCGAACACTGAATTTGGCTCCATCACCACTACATTCTTGTCATCTTCTATTA
CAGATGTGTCCACTAGCTCAACCGCCTCCGATGACGAGCAGTCCTCTACCGCTTCTATCC
CTGAGTCCAGTTCCGTGATGTCGACTTTGTCGTCTTCTGCTGCCATTACTGAGTCTCTCA
GCTCCGGATCTGTGTCCGAGACTTCAGCTGTGTCCAGCACTCGAACACCAATCATCTGTG
CCCGAGACGGTATGAATGAAGAGGATTGTATCACTCTCACTGATGAGTCCAGCATCGTAG
AGTCTGCTACCACTTCCGGTGGTGTCTCGTCTGAGTCGTCTGCCATCCCTAGCACTGATT
CTGTGACAGCTTCGACCACTTTTGAGTCTTCTGCCACAGGTGTGCCCACATCCTCAGAGA
TCCAGCCTACGTCATTTGTCGAGTCTTCAAGTGAGTCTGCCTCTTCCACAGCTGAGTCCT
CTTCTGTGTTTGAGCCTTCTTCTTCTGTCGTTGAGCCTTCTTCTTCTGTGGTCGAGTCCA
CCTCTTCTGAGGTTACTAGTGATACTACCTCTTCTACTGCTGAGTCTTCTTCTGTCGTTG
AGCCCACCTCTTCTATCGTCGAGATTACCTCTTCTCAGGTTACTAGTGAATCTGCCTCTA
TCACTGCCGAGTCTTCCACCGTGGTTGAGCCTACTACCTCTTTGATTGAGCCTTCTTCCC
AGGTTACTGGTGAGCCCACCTCTTCTGTCGTCGAGCCCACCTCTTCTGTCGTCGAGCCCA
CCTCTTCTCAGGTTTCTAATGAGTCTTCCTCTTTCACAATTGAGTCGTCTCTCACTGAGG
AGTCGGTCACTTCTTCTATCGCCACCCCAACCTTTACAGGCGAGGGATCTATCACCACTA
CCATTATTGAGTCTACCTCCTCTTCCGAAGAGTCAGCGTCTGCCACCACTGATGCTACCC
CCACCGGCGAAGAGACTGCCTCCACTACTTCGGAGCAGTCTTCTGCCACCCCTACCGGTG
ATGTTTCTTCTGCCACTCCTACCGGCGATGTCTCGTCTTCCACTCCTACTGATGACGTCT
CGTCTGCCACTCCCACCGGCGAAGAGACTGCCTCCACTACTTCGGAGCAGTCTTCTTCTG
CCACTCCTACCGGTGACGTTTCGTCTGCCACCCCTACCGGTGACGCTTCGTCTTCCATCC
CTACTGGTGATGTCTCATCTGCCACTCCTACCGATGACGTTTCGTCTTCCATCCCTACTG
GTGACGTTTCTTCTGCCACCCCTACCGGTGACGCTTCGTCTTCCATCCCTACTGGTGATG
TCTCATCTGCCACTCCTACCGGCGATGTCTCGTCTTCCACTCCTACTGGTGACGCTTCGT
CTTCCATCCCTACTGGTGACGTTTCTTCTGCCACTCCTACCGGTGACGCTTCGTCTTCCA
TCCCTACTGGTGACGTTTCTTCTGCCACCCCTACCGGTGACGCTTCGTCTTCCATCCCTA
CTGGTGATGTCTCATCTGCCACCCCTACTGGTGACGCTTCGTCTTCCACCCCTACTGGTG
ACGTTTCTTCTGCCACCCCTACCGGCGATGTCTCGTCTTCCACCCCTACTGGTGAGCCTT
CTTCTTCCCGGGTTACTGGTGAGCCCACCTCTTCTGTTGTCGAGCCCACCTCTTCTCAGG
TTTCTAGTGAGTCTTCCTCTTTCACAATTGAGTCGTCTCTCACTGAGGAGTCGGTCACTT
CTTCTATCGCCACCCCAACCTTTACAGGCGAGGGATCTATCACCACTACCATTATTGAGT
CTACCTCCTCTTCCGAGGAGTCAGCCACCACTGATGCTACCCCCACCGGCGAAGAGACTG
CCTCCACTACTTCGGAGCAGTCTTCTGCCACCCCTACCGGTGATGTCTCATCTGCCACCC
CTACTGGTGATGTCTCATCTGCCACTCCTACCGGTGACGCTTCGTCTTCCATTCCTACTG
GTGACGTTTCTTCTGCAACCCCTACCGGTGACGCTTCGTCTTCCATCCCTACTGGTGATG
TCTCATCTGCCACCCCTACTGGTGACGCTTCGTCTTCCACCCCTACTGGTGATGTCTCAT
CTGCCACTCCTACCGATGACGCTTCGTCTTCCATTCCTACTGGTGATGTCTCATCTGCCA
CTCCTACCGGTGACGCTTCGTCTTCCATCCCTACTGGTGATGTCTCATCTGCCACCCCTA
CTGGTGACGTCTCGTCTGCCACTCCCACCGGCGAAGAGACTGCCTCCACTACTTCGGAGC
AGTCTTCTACTGCCACCCCTACCGGTGACGTTTCGTCTGCCACCCCTACCGGTGACGCTT
CGTCTTCCATCCCTACTGGTGATGTCTCATCTGCCACTCCTACCGGCGATGTCTCGTCTT
CCACTCCTACTGGTGACGCTTCGTCTTCCATCCCTACTGGTGACGTTTCTTCTGCCACTC
CTACTGGTGACGTTTCTTCTGCCACCCCTACTGGTGACGTTTCTTCTGTCACTCCTACCG
GCGATGTTTCTTCTGCCATCCCCACCGGTGAAGAGACCGTTTCCACTTCCGGTGTTGTTC
CCATTTCTTCTGGTCAAGAGTCTGCTTCAACATCTACAGATTCTAACTCTGCTACCGTTT
CCTCTTCTGGCCAGGAGTCTGCCACTGGTTCCACGTCCGGTGCTGTTCCTACATTTGGTG
AGCAGTCGGGCATCACGTCTGGATCTACCCCTACATTCACTGGTGACAATGGTTCTACTG
CCACTGTCCCCATCTCGACAGAAGGCTCTGGAATCAACTCTGGAGAACTGGACTCTGCCA
CCCTTGAGGTCCCCACTGCTACATCTGCAACTGGTACTGTTTCCGTTGAATCTCAGATCA
CATCTTCTTCTGGAGGTGGTGGAGGTCTTGCCTCTGAAGACATTCCTGGATCCGCTACTG
CTACTGGCACCGCTACTGTTACTGGCCTGGTTCCTGATGTTACTGGCTCGGCAACTGCCA
CAGGTTTGGCTTCTGAGGATCTTTCCGGCACTATCAGCCCACTTCCTACTACCACCAACT
TGTCAGGCGCCTCTCAGCCTCTCACTACCATGTCTACTTCTACACTTGGTGGCGGTGGTG
CTATTGATGGTGGTTCGAACGGATCTGGCTCTGGTTCAGGCTCTGAGGGCTCCGGCTCTA
GTTCAGGCTCTGAGGGCTCCGGCTCTGGTTCAGGTTCTGAGGGCTCCGGCTCTGGCTCTG
GCTCTGGTTCAGGTTCTGAGGGCTCCGGCTCTGGTTCTGGCTCAGGTTCAGGTTCAGGTT
CTGAGGGCTCCGGCTCCGGCTCTGGCTCTGGCTCTGGCTCTGAGGGCTCCGGCTCTGGCT
CTGGCTCTGGTTCAGGTTCTGAGGGCTCCGGCTCTGGCTCTGGCTCTGGTTCAGGTTCTG
AGGGCTCCGGCTCTGGCTCTGGCTCTGGTTCAGGTTCTGAGGGCTCCGGCTCTGGCTCTG
GCTCTGAGGGCTCCGGCTCTGGCTCTGGCTCTGAGGGCTCCGGCTCTGGCTCCGGCTCTG
AAGGTGAAGCACCTCCCCAGTCGCCTGGTGGTGAGACCCTGCCTCCCCAGGCCAACTCTG
CGAAGACTTATGGTGTCTCTGCTGGTATGATGGGCATGGTTATTTTGGTTGTTCTTTTCT
AA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C04136g_CDS-001

Protein length: 2401 aa.
Product: Hypothetical protein

>YALI0C04136g_CDS-001 MKISLLLSVSGALLAAAGPVQYKACLPASSLSAEACVSSCDDFLTLGSDPEQCLQCLSVF
DLPDQKWDVYDRLEELGLAPTPQITVCGAENPQITPAPAPVPVPVLEKRAPIVTVSCSTA
TTSRDSCLTTCGNIINQIALCLGVRSCICDRIVTFNNNVETCLECITRFDFGPVFDIPGR
FLQFLAQCDRATTVPPPVCVTRTIDTKVSCEPDTFTSTCSVANNDNMSLLKCTETCTSII
TSIGLCLGFRSCICNRLAAVTTAVAQCIQCVSIFDLSGIPFLAANFLNVLGQCGVNSQAL
TSCSPLTISGKCVTISSTLPPAPVTSAAVTTSSKPPAPASTSSPVVSSTNPASSSPVVVP
SSTNPVVSSSPVVVPSSSAPASSSSSSSPVVVPSSTNPVVSSSPVVVPSSSAPASSSSSS
SLVIVPSSSTPASSSPVVVPSSSVVVSSSTPAIPTSSSAPVVVPTPSSSAGITPPPVSSS
RAAVSTFTSCSTVTQSRDSCVKTCGDIIREIALCVGVQQCICDRIATFNNNVEECLSCIT
YIDFGGLFNFPDQLLRFIGGCGRPTTASDVCVTKTIDPAVSCEPDVTSSTCSVGNNKDLS
FTQCFNTCTSIVSSIGLCLGIRSCICDRMASTAEAVGDCIQCVSLFDLGNIPFLGANFLN
WLGNCGINSQATSQCSYQTIAGECSTLSSSVIITSAAQSTSSSASIPTSSALTGVSSTSS
TDTGLSSATSSSASSSDVSSSASDSAVTSTESGASSTATDSVASSGASSSDVSSTAFGSS
SSITASDSGSLSPSPSSTESSDASTHMSTASSTVTGSDTTSSASSSDVSSTAFGSSSSST
TSDSSLSSTETSEISTITSAPSTSTGPVATTITSCSTVTQSRDSCIKTCGDIIREIALCV
GVQQCICDRILTFNNNVEECLSCITYIDFGGLFNFPDQLLTFLGGCGRPTTASEVCVTKT
IDPSISCEPDVTSSTCSVSNPRDFTISQCLKTCGDIVSSIGLCLGVRSCICDRMENTAQL
VGDCIQCVSLFDLGSIPFLGANFLNWLGQCGVNSQAASNCVYQTITGECHTLSSSVVITT
AAQSTTSSSAVVVPSSSVPTIVSSTATTDIVSPSSSTADGSTSSDGITSATSESSSTITA
TISDSGSTTQLSSSGISSDISGSVSQTSESSAGTSTVETLTSDSNTEFGSITTTFLSSSI
TDVSTSSTASDDEQSSTASIPESSSVMSTLSSSAAITESLSSGSVSETSAVSSTRTPIIC
ARDGMNEEDCITLTDESSIVESATTSGGVSSESSAIPSTDSVTASTTFESSATGVPTSSE
IQPTSFVESSSESASSTAESSSVFEPSSSVVEPSSSVVESTSSEVTSDTTSSTAESSSVV
EPTSSIVEITSSQVTSESASITAESSTVVEPTTSLIEPSSQVTGEPTSSVVEPTSSVVEP
TSSQVSNESSSFTIESSLTEESVTSSIATPTFTGEGSITTTIIESTSSSEESASATTDAT
PTGEETASTTSEQSSATPTGDVSSATPTGDVSSSTPTDDVSSATPTGEETASTTSEQSSS
ATPTGDVSSATPTGDASSSIPTGDVSSATPTDDVSSSIPTGDVSSATPTGDASSSIPTGD
VSSATPTGDVSSSTPTGDASSSIPTGDVSSATPTGDASSSIPTGDVSSATPTGDASSSIP
TGDVSSATPTGDASSSTPTGDVSSATPTGDVSSSTPTGEPSSSRVTGEPTSSVVEPTSSQ
VSSESSSFTIESSLTEESVTSSIATPTFTGEGSITTTIIESTSSSEESATTDATPTGEET
ASTTSEQSSATPTGDVSSATPTGDVSSATPTGDASSSIPTGDVSSATPTGDASSSIPTGD
VSSATPTGDASSSTPTGDVSSATPTDDASSSIPTGDVSSATPTGDASSSIPTGDVSSATP
TGDVSSATPTGEETASTTSEQSSTATPTGDVSSATPTGDASSSIPTGDVSSATPTGDVSS
STPTGDASSSIPTGDVSSATPTGDVSSATPTGDVSSVTPTGDVSSAIPTGEETVSTSGVV
PISSGQESASTSTDSNSATVSSSGQESATGSTSGAVPTFGEQSGITSGSTPTFTGDNGST
ATVPISTE


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG