YALI0C04114g

Overview

Description weakly similar to uniprot|P53281 Saccharomyces cerevisiae YGR136W (ohnolog of YPR154W) LSB1 negative regulator of actin nucleation-promoting factor activity
Locus type CDS
Locus tag YALI0C04114g

Location

Species Yarrowia lipolytica Positions 541959..542929
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 971 (nuc.)
Previous locus YALI0C04092g Next locus YALI0C04136g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C04114g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C04114gYALI0C04114g_mRNA-001YALI0C04114g_CDS-001

Nucleotide sequence

 

>YALI0C04114g
ATGGCGGCAGTTATCAACCGAAGTGTGACTTCGCTCCACAACGAGCTGGAGTTTCTGTTT
GAGTCCGAGGTGATTTCCCAGGCTCTTTATGACGATATTTGCAACAAGATCCCTCGAAAG
CTGACACCTGGTCAGAAGCTGGACTTGCCTGGTTCTCAAGTTGTTGGCATTGCCGAGGTG
ACTGAGCGGGTTGCAGCTGTTCAAATCACCCCTGCTGCCCCCTCCCCTCCCGTTGCTGTT
CATCCTGCCTCTGCTGGTTCAGGTGGCAAGGTGGAGGCTCTCTATGACTACGTCGCACAG
GACCCCACCGACCTGGCTCTTGTCAAGGGCGACCAGATTGACATCATCGAGAAGCTGAAC
AACGACTGGTGGAAGGGCCGAGGCCCCAGTGGCAAGGAGGGAATCTTCCCTGCCAACTAC
GTCAAGGAACTGTCTGATACTCCCTACATGGCTCCTCCTCCCGTGAGCCGATCCCAGAGC
ACTGTATCGTCTGTGGCTGCGGCAAGCTCCACCACCACTCTTCCCACGGTGTCCTCTTTG
GCCGTGAACGAGGAGAAGTCCGAGAAGTCGGCCTACCCTTCTTACAAGCAGCCGGACTAC
GCCGCTCCCGCCGCCCATTACAACCCTCCTCCTCCCACACAGTACAACCCCCCTCCCCCA
GAGCAGTATGGCTACCAGGCCCCACCTCCCCCGGGATACCAGGGAGGGTACCAACCTCCT
CCTCCCCAAGGCTACCAGGGCCAGCAGCAGCAGCAATACTACCAGCCCCCTCCTCCGCAG
ACTGTGGTTGTGGAGCAGGGCCAGCAGCATCAGGGTGGCGGAGGCCATCTCAAGAGCATT
GGTTCAAAGTTTGGAAACGCAGCCATCTTTGGTGCTGGAGCTACCCTTGGTGGAGACCTC
ATCAATTCTATCTTTTAATCACGAAGTAACGTCATAGAGAATATATTTATTGCCTAGTCT
GTTGACAGACC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C04114g_CDS-001

Protein length: 306 aa.
Product: Conserved hypothetical protein

>YALI0C04114g_CDS-001 MAAVINRSVTSLHNELEFLFESEVISQALYDDICNKIPRKLTPGQKLDLPGSQVVGIAEV
TERVAAVQITPAAPSPPVAVHPASAGSGGKVEALYDYVAQDPTDLALVKGDQIDIIEKLN
NDWWKGRGPSGKEGIFPANYVKELSDTPYMAPPPVSRSQSTVSSVAAASSTTTLPTVSSL
AVNEEKSEKSAYPSYKQPDYAAPAAHYNPPPPTQYNPPPPEQYGYQAPPPPGYQGGYQPP
PPQGYQGQQQQQYYQPPPPQTVVVEQGQQHQGGGGHLKSIGSKFGNAAIFGAGATLGGDL
INSIF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG