YALI0C04158g

Overview

Description similar to uniprot|P18961 Saccharomyces cerevisiae YMR104C YPK2 (ohnolog of YKL126W) Protein kinase with similarity to serine/threonine protein kinase Ypk1p
Locus type CDS
Locus tag YALI0C04158g

Location

Species Yarrowia lipolytica Positions 553961..556233
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 2273 (nuc.)
Previous locus YALI0C04136g Next locus YALI0C04180g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C04158g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C04158gYALI0C04158g_mRNA-001YALI0C04158g_CDS-001

Nucleotide sequence

 

>YALI0C04158g
ATGGCCTGGAATTTGACCAAAAGTGAGTGTGACAAGACAGACACCCAGATACGACATGAT
ACACAGACAATAAATACGATACAATCAAGATCAGGCACAGGTATCGCACTGCCATCTCAT
GATTAGTGCATATGGTGGCGTCTTGATCTGAGCACCCTGGACCCCGAATGACCAATTATT
ATGGCGGATATCATCGCCGAACAGTGCTGGCCATGTAATAACCAACTAACACAGAACTCA
AGGAGACGACTCTGTCGTCGTTTGGAGGACGGTCTTCGTCTCAGACAGTGACAAACCTGC
CCACAGTGTCTACTAAGCCACAAGCACAAACAAAGGCGCCGCCGCCCAAGAAGAAGCAGC
CCGAGGGACCGAAGCAGCCTGATGGACCCCCTACACCCACCCTCAAGTCTGGGTTTGCAA
ACAAGCTGACTACGTCTCTGTCCCACAACTCGACCAAAAGCCACAAAAGCCAGACCACCG
TGCAAACCGTGCAGTCTAATCACACATCACTGAAGGATATCACCGCCGCCGTTGCCACCC
CCGTGAGCACCCATGCCAGTACCCATACCCAGACCAGTGTTGATGCCGACTCGGCCACGG
CCGCAACCACTGCCACCGCAGCCACAACGCACAGCACTGAGGACCTCAAGCCCGTAACGT
CCATTTCCAAGCCTCATTCGCCACATTCGCCCTCCGTGCCCGCTGCAGGCGTGCTGGATG
TGTCCATTTTTGGAACTGAGGGCCTGTCACTGCCTGACGCTTACAAAAAATATTCTGCAT
ACTTTGAGGAGCAAGACAATGGGGGACCGCCTCCAGTCTATCTCGTTTTGGAGTTCGATA
AGACCCAATTGCTGCTCGAGCCGACGGGTGGCACCGCTCTGGACTGCCCCATTTGGAATG
CCCGGTCTTCGTTTGACGTCTCCCGTACAGACGAGGGTCTCACGATCAATATCTACGCCA
AGCTTCCAACCACGCTAATCCAGAATGAAATCCACCCTCTCCTGGGCCGTAGCAGCGCTT
TGGGAGACGAAAAGTCGACCAACACGGTGCTTGACGTCTTCCTCGGCTGCGTGCGAGTGC
GCCCCGCGCTGACACATGCCAACCGGTCTGTGGACGGCTGGTGTTCGGTGTCATCTGGCA
CGGGAAGACTCAAAATCACCGTGGATTACAAACCTACACCGAAGTCTCAGTCGCAGCTGT
CAATGCAGTCGTTTGAGCTGCTTAAGGTTTTGGGAAAGGGCACCTTTGGAAAGGTAATGA
TGGTGAAGAAAAAAGACACGCATCAAATCTATGCTATCAAGTCTATTTACAAACACTATA
TCATTTCCACGGACGAGGTTGCTCACACACTGGCCGAGCGGACCGTCTTGGCCCAGATTC
GCAACCCCTTTATTGTTCCGTTGAAGTTTTCGTTCCAGAGTCCGGAGAAACTCTATCTTG
GGCTGGCATTTGTGAATGGAGGCGAGCTCTTCTACCACTTGCAAAGAGAACGCTTCTTTG
ACCTCAATCGAGCACGTTTCTACACCGCAGAGCTACTCTGTGCTCTTGAGTGTCTACATG
ACTACAACATTGTGTACCGGGATCTGAAGCCGGAGAACATTCTGTTGGATTACATGGGAC
ACATTGTTCTTTGTGATTTTGGTCTGTGCAAGCTCAACATGACGTCTGACGAGAGAACTA
ACACCCGCTGCGGCACGCCTGAGTACATGAGTCCCGAGATTCTTCTGAACAAGGGATACA
ACAAGTCCGTGGACTGGTGGACTCTTGGTGTTTTACTGTACGAAATGTTAACCGGACTCC
CGCCATTCTATTCCGACAATCACAATAAGATGTATCAGCGGATCCTGAATGACCCGCTAA
GGTTTCCTCAGGGTATGGATCCCACGGCGGTGGATATTATTACAGGGCTGCTTCAGCGAG
AACCTTCTGAGCGTTTGGGGGCCGGGGGTGCCCAGGAAATCAAGGCCCACCCCTTTTTCA
AGGACATTGATTGGAATAGGCTTCTTGCGAAGAAGTACTCGGCGCCCTTTAAGCCCAGGG
TTCTTGATCCTACTGATACGAGCAACTTTGATCGCGATTACACGAGTATGGTTCCTCAGG
ATAGTGTTACCAATGACTATCTATCGGACAGCGTGCAGAAGCAGTTTGGCGGCTGGACTT
ATCTGGACCAAAACGTGTTGCATTAAGCTAGATTAGGGGGAGAAAGAGTGTGTGACTGTG
AAGTACAAGTAATTGTATGTACAATCAATTAATTATTATCATGGCAGACGCTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C04158g_CDS-001

Protein length: 658 aa.
Product: Protein kinase similar to serine/threonine protein kinase Ypk1p, putative

>YALI0C04158g_CDS-001 MAWNLTKKLKETTLSSFGGRSSSQTVTNLPTVSTKPQAQTKAPPPKKKQPEGPKQPDGPP
TPTLKSGFANKLTTSLSHNSTKSHKSQTTVQTVQSNHTSLKDITAAVATPVSTHASTHTQ
TSVDADSATAATTATAATTHSTEDLKPVTSISKPHSPHSPSVPAAGVLDVSIFGTEGLSL
PDAYKKYSAYFEEQDNGGPPPVYLVLEFDKTQLLLEPTGGTALDCPIWNARSSFDVSRTD
EGLTINIYAKLPTTLIQNEIHPLLGRSSALGDEKSTNTVLDVFLGCVRVRPALTHANRSV
DGWCSVSSGTGRLKITVDYKPTPKSQSQLSMQSFELLKVLGKGTFGKVMMVKKKDTHQIY
AIKSIYKHYIISTDEVAHTLAERTVLAQIRNPFIVPLKFSFQSPEKLYLGLAFVNGGELF
YHLQRERFFDLNRARFYTAELLCALECLHDYNIVYRDLKPENILLDYMGHIVLCDFGLCK
LNMTSDERTNTRCGTPEYMSPEILLNKGYNKSVDWWTLGVLLYEMLTGLPPFYSDNHNKM
YQRILNDPLRFPQGMDPTAVDIITGLLQREPSERLGAGGAQEIKAHPFFKDIDWNRLLAK
KYSAPFKPRVLDPTDTSNFDRDYTSMVPQDSVTNDYLSDSVQKQFGGWTYLDQNVLH*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG