YALI0F32175g

Overview

Description some similarities with uniprot|F4PIA3 Dictyostelium fasciculatum DFA_02780 Putative uncharacterized protein
Locus type CDS
Locus tag YALI0F32175g

Location

Species Yarrowia lipolytica Positions 3989661..3992229
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 2569 (nuc.)
Previous locus YALI0F32153g Next locus YALI0F32197r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F32175g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F32175gYALI0F32175g_mRNA-001YALI0F32175g_CDS-001

Nucleotide sequence

 

>YALI0F32175g
ATGGAAGACAGATTACAGCAAAGGGTACGGGAGACTTTGTCACTACCGAAAGTCTTCGAC
CGGCTGGACTCCTATTTTCTATTCTTTTCGGCATGGTACAGACGCGTTTCCAAGGACTAC
ACATTACAAGAACCGGAGGAATATGAGAAGGAGCGTCAGAATGCCGCCTTTATCGTCGAC
AATGATTCAAACACGGGCGAGGAGGTTGTGAGAGTGACCAGAGATCACGTGCCTTGGGTG
GTGCTTGCTGCTCACTTCATGACGGGGTGCTCTACGAATGCTACTTACGTGAGCGAACTG
CTAGAGAAACGACTCAACATTGGAAGAATTCCGAAGGAGATGGTTGAGAGTATCATTGCA
TGGAGTATATCTGGCATGCATATGGACGAGAAGCTGGCATTGCAAGCTCTGGAGGCACGG
CTTGACGAGACGGAGAGTGGCAGGGCCTTGACCCAAAGCTTGAAGGATAAGATGCAGAGG
ACGATTTGGGACAAGGTGTTTCAGCATCATCTGAAGAATTCGCAATTAAACCCAATCTGC
GAACGACCCGGAGTTGTGTTTTTTGCCCTGTTTCCTTTGTCTAACGCGAATGGATATTCT
CTGCTCTTCATCGATTATCTCACCAAGGCTGCCACATTCAGCATACCTTGCAAACCCAAA
AACGCGCTGGACCTGATCAGGGACATTCGGGTCGCCGTTTTGGATCATTTAAGAGCATAC
GGACAGCCCTTGGCCCTAATTTGCATGAACCCCTGTCGAGGAACGAACGGATGGCTTGGA
AGCGTACTTCAGAAGGCATTCAAGCACATGGTACCTTTCGATACGGTAGTGTCCATCTAC
GAACTTCGGGCCCGCTCACTTCCATCCCGAATAGCTGAAGTTTTCGAAGAAGCAACTACA
GCTGTGAGAGACCCCAATGATACCTTGAAAAATAGCCAACCATTCTGTTTCCTCAGAACC
CAGAACACCCACGAGACTTGGGAGCATCTCGTGTTGGGCCATTTTATGACTCTTCAGAAT
CGCTCCTTTGTAAGACATCCTCGAGACCTGGAGTCGGGTGCTACATCTGATAATATGAAT
ATCTGTTTTCACATCATCTACGAAGTGAATCTCTCTCTGCCTTCATCTAAGATAAGCAAC
GAGGCATGGTCTTGTATATTCTTTCCCAATCCCTTTCCAAAAGCGAAGCTTGACCTATTC
AAGCCAGAGAAAATGCCCAGAGCTCTCGAGAATGAACTCAAGGAAGTTACAGCGCTATCC
CTCGATTTCACACTTTCTCCCGAGACACCTGCTTTACCTGCAGACATGCTGGAGTTTGAT
GAGACTTCTAGACGCATCGTTGCATTTTGCTTCCGAAAGAGGCGTGACAGGGTCTTGCCG
AAGAATTTTGTGGAAGAGCTTGAGCTGAGAAAAATCAAGAGAGCGAGAAAGGATGCCGAG
GAGTCGGAGAAGAGACCCGTTGAAGAAGCTGCTGATAAGAAAAAGCAGCAGGAGGCTGAG
AAACAGACTTCTGGTCTACAAAACGCGGAGGAGGAAAAGATGCCACTTGCTGAAGAGCCT
GCTGAGAGGCCGGCTGGAGAGAAACGACGATTAACAGCAGAAGCCGAGAAACAAGGGCTG
GCTGAAGCAGAAGCTGAGAAATTGACGGTTACTGGAGTTGGACGCGTCAGACAGACTGAG
GAAACTGAGAAACAGATACTGGTCGGCGAGGAAGCTGGAAGATTGCGACAAGCTGAGGAG
GAGGAGATTCAGGGATTGGGTGAGGAGGAAGTGGAGGTGGAGAGGGCGAAGCCGGCTACT
GAGGCTAAAGATGCTGCTGAAGATGAGAGCCAAAGACTTGCAGAAGAGTGTGAAGAGGTC
GGGCGTCATAGACAGACAGAGGAGGGGGAGCGACTCAGACTGACAAAAGAGGAGAGAACG
AAGCATGCTGACGAGGAAGAGAGGGCCAAACAGGCCGATCAGGTTATGGAGGCTATGGCA
TCTTTCACGGCCGAAAAGAAAAGACTTGCCGAGGAGGCCGAACGAGAAAGACTAGCCGAT
AAGGCGGCCGAGGAGCAGAGGTTGGCGATAGAAGCGGTAGACATGGAAAGGGCTGAGGCA
GAGGAACAGAGCCGGCAGGAGGTGGCCATTTTGGACTCACCAGACGACAGCGAATCTTCC
CAGGAGATACAGGTTGAGAAGACTGCTGCTGAGGAAGTGGCCGAGAATCTCAGGGTCCAA
GAGGAATGGAGACGACAAGAGGCTGAAAGACAGAAGGAGATTGAGGCCATCCTAGCGGCT
GAAAGAAAGGAGAAGGCTGCTAAGGAAGCTGAGGTTGAGGCCGAGACCAAAGCTAATGCA
AATATTGAGGCTGAAGCTGCTGACACCACTCTTACCGAAGAACGCCAAGCAGATTTGGAG
GATGAAGAGGATCTGCCCCCTACTAATAACCCCATTACAGCATTCCTCAGAACTGTCAAG
CTGGCTCTGAATCGAGCACCACCACCTAGGAAATAGAAGCTATCAAACGGCTTGGAAATA
TATATACATCAATAATTTATAATTTAATATTCAATGGCAGCTACAGGAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F32175g_CDS-001

Protein length: 832 aa.
Product: Conserved hypothetical protein

>YALI0F32175g_CDS-001 MEDRLQQRVRETLSLPKVFDRLDSYFLFFSAWYRRVSKDYTLQEPEEYEKERQNAAFIVD
NDSNTGEEVVRVTRDHVPWVVLAAHFMTGCSTNATYVSELLEKRLNIGRIPKEMVESIIA
WSISGMHMDEKLALQALEARLDETESGRALTQSLKDKMQRTIWDKVFQHHLKNSQLNPIC
ERPGVVFFALFPLSNANGYSLLFIDYLTKAATFSIPCKPKNALDLIRDIRVAVLDHLRAY
GQPLALICMNPCRGTNGWLGSVLQKAFKHMVPFDTVVSIYELRARSLPSRIAEVFEEATT
AVRDPNDTLKNSQPFCFLRTQNTHETWEHLVLGHFMTLQNRSFVRHPRDLESGATSDNMN
ICFHIIYEVNLSLPSSKISNEAWSCIFFPNPFPKAKLDLFKPEKMPRALENELKEVTALS
LDFTLSPETPALPADMLEFDETSRRIVAFCFRKRRDRVLPKNFVEELELRKIKRARKDAE
ESEKRPVEEAADKKKQQEAEKQTSGLQNAEEEKMPLAEEPAERPAGEKRRLTAEAEKQGL
AEAEAEKLTVTGVGRVRQTEETEKQILVGEEAGRLRQAEEEEIQGLGEEEVEVERAKPAT
EAKDAAEDESQRLAEECEEVGRHRQTEEGERLRLTKEERTKHADEEERAKQADQVMEAMA
SFTAEKKRLAEEAERERLADKAAEEQRLAIEAVDMERAEAEEQSRQEVAILDSPDDSESS
QEIQVEKTAAEEVAENLRVQEEWRRQEAERQKEIEAILAAERKEKAAKEAEVEAETKANA
NIEAEAADTTLTEERQADLEDEEDLPPTNNPITAFLRTVKLALNRAPPPRK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG