YALI0F32153g

Overview

Description similar to uniprot|P46677 Saccharomyces cerevisiae YGR274c TAF145 TFIID subunit (TBP-associated factor)
Locus type CDS
Locus tag YALI0F32153g

Location

Species Yarrowia lipolytica Positions 3985784..3989073
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 3290 (nuc.)
Previous locus YALI0F32131g Next locus YALI0F32175g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F32153g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F32153gYALI0F32153g_mRNA-001YALI0F32153g_CDS-001

Nucleotide sequence

 

>YALI0F32153g
ATGGCCGACGAAGACGCTGACTGGGCCAGAGCACTCGGTGGCGACCCTACCAACGTTGGA
GGTGTTGTCCCATCGCTTGATGGTGCAGATGCCATCAAACACTCCGCAGACGCCATCGAT
TTCGAGGACGAAGACGAGCTGGCAGATGATGAGCTGCCCGAAGAGGAGGAAGCAACCGGA
AACAACGTGATTGAGGAGGATGAGGAGATGATTGTCGAGGAGGAAGCTGGTCTATCCATG
TCTGGGAACGATAGCCTGGGTGGCTTCCAGTTCCACATTGGCGAGGATGAGCTTGGAGGA
TTTGATCTGGGAGATGACGAACATTGGAGCCAGAGCTGGGGAGGCAACGAAATGGACGAG
CTGCCTGTGATGGACGAGTACGATGATGGTGGTGTTGTCCATGCTGGAATGTTGAATAAC
AATGCCAACAGCAACAACCATGTCGTGCATGCCGGTGAACCTGGAGAGTCAGACGAAGAG
ATGGAGATGGAGGCTGCTGGAGGCGACGGGCTGGACATGAAGCTTGACGCAGATGAGCTA
GGCGAACTGGGAAAGTTAGGGCCTGCCGACAAGATGGACGCCTCTGGATTTGATGACATC
CAACACATGAACATCCAGGAGCTCAATCTGGAGGAAATTGCACAGATGGCGCGTCAGGCT
GATCTTGACATGCTTGCAATGTACTTCCCCGGGTTCCAAAAGGGCAAGCCTATGAAGATG
AACTCGCTCTTCTACAACAAGTTTGCTGTTCTGAGTCTGCCCAAGCCTAACACTGCTCGT
CCGTGTGTCCCCACAAAGACTAAGCTGGAGGTGGCGCCAGATGAGCGTAAGATGACACGA
GGAACAGTGTGGGTGGACCATGCTAAGCGGCGACCGGGTGTTGTAACAGTCACCGAGGCC
GAGACGGGGGACGATAAGCAGGAACTGGCCCGAGAAAGCAGAACCACACAATCAGCAACA
GACCAGCAGCTGCATTTCGACATTACTGACTGGAAGATCACGTGGGGAGATGAGGATGAT
GGGGATGGAGACGTGGATATGGATTGCGAGGGCGAAAAGGTCAAGGAGGAACAAAAAGAG
GTTGTTCCACAGCTCGGCGTGCACAGAAACGAAGAGGCCTGGAACGACGAGGCCTTGTTT
GAAGGCGATGCTCTCAGTCAGGTGAAGAAGGTCAACCTCGATATGAACGACCCCAACCTA
CTGTTCATCAACACAGATGGTCGTGTATCGAAGAATGTGACTCCTGCCATTCCCTCCACC
GAACTACAGCTTCGAAACAGATTTAACCTCAGTAACGACCGAGCCTACGATATGCTCAAG
GAGAACACACAGAGCAAGGTACGAGCCACTATTGGCAATCTGTCTATCGATCACTCCATG
CCAGCTCTCCGACTGCAAAGTCCATTCTACAAAGTGCGAATCTCGAAGCCTCAGGCTCGT
TCGTTCCATCGGCCATCATTTGTGGTGAAACCCAACACTACTGTTCACTTTTCGCGAATG
AAGATCCGAAAGAAGAAGCGAGACAGGGGAAAGCCTATCAAGGATCTTTTGGCCAAGACT
ACGGACTTGTCGTTGGGTGACTCTGCTCAGTACTTCCTCATGGAGTACGCTGAGCAATTC
CCCATGACCCTCTCCAACTACGGAATGGGCTCTAAGATGATCAACTATTACAGAAAAGCT
TCTCCTGAGGATACTTCCCGACCTAAGCTCCCCGTTGGAGAGACACATGTTCTGTCGGTC
CAGGACAAGTCTCCCTTTTGGAACTTTGGATTCGTCGAGCCGGGTAAGATTGTGCCTACT
CTGTACAACAAGATGATCCGAGCCCCCGTATTCAAGCATACACCACGTGACACAGATTTT
CTTATGATCCGATCAACTGGAGGCGATGTGACTGGGGCTGGCCAAAAGTACTTTCTGAGA
AATATTCCACATGTCTTCACTGTCGGTCAAACATACCCCGTGACTGACGTACCCGGGCCA
CACTCTCGAAAGGTAACCACGGCTTCCAAAAACCGGCTCAAGATGATTGTCTATCGAGTG
CTAAACGCATCACCTTATCATAGAATCAACGTGAAGGATATCGCCGAACATTTCCCTGAT
CAGATTGACACTCAAAACCGACAGAGGCTCAAGGAGTTTATGGAGTATCAGCGAACAGGT
GAGGATCAGGGTTACTGGAAGGTCAAGCCTACCGATACTCTTCCTGGCGAGGACGGCATC
AGAACCATGATCACACCCGAGGACATCACTCTCTTGGAGGCCATGCAGGTTGGTGTTCAG
AACCTTGAGGATGCTGGATATGGTCGAACTGACGACATTGAGAGCGACCATGAGAATGGC
GAGGAGTCTGGTCTTTCTCTGGAGGAGCAGTCTGCTCCATGGAACCTGACCAGAAACTTC
ATCAACGCTACCCAGGGCAAGGCCATGCTGCAGCTGCATGGCGAGGGTGATCCTTCTGGT
CGAGGCGAGGGTTTCTCATTCCTCAAGACTTCCATGAAGGGTGGTTTTCAGGCCGCTGGT
GAGTCTGTCAATGAGAAGCTTGACAAGAGCAAGTTTGGCGGACACAAGTACAACGTGGCC
CACCAGCAGCGTGCATACGACGATGAGATCAGCCGAATCTGGTATGCCCAGTGTCGAGCT
CTCAGCAACACCAAGGTACCTGAAGAGAACGACGAAGATTCAAAATGGGCCGATGCTGAG
GAGCAGCGAGAACAACAAGAGCGGGTGTCTACGCCTGGTTTCACTAGCGCAGCCTTCCCC
GACGATGATAACATGTCGCTCATGTCAGGCGACTCGGCCATGCAGCAGCGCAACAAGGTG
CTGCGAATCACGCGAATGGTCAAGGACGAGCACGGTATCATCCAGCGAAAGGTCGAGACC
ATCAAGGACCCCAGTGTCATTCGAGCATACATTCGACGACGAAAGCTGATGGACGAGGCC
AAGCTAACACTCGACGACTTAGACCCCACCAACGACGAGGAGGCCAACAAGCGAAACAAG
CGGCTGCTGGAGGAGCGGCTGGAGGATCTGCGAAAGAAGGGCGAGCGACGAAAGCAGCGA
CAGGCCCAGAAGCAGGGTCTCAACACAATCAACCTCGGCACCGACACTCCTCCCCCTTCA
GGCAAGGGTGTCGGCAAAGGCAAGGGTCCGCGACAGTGCAAGAACTGTGGTGCATATGGC
CACATTCGAACCAACAAGAGTTGTCCCATGTACAACCAACTCGAGGGACCTGCCAACCTG
TAGTTGTATAGCATGGAGGAATAGTAAATTATTATGTATTATTGCACAGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F32153g_CDS-001

Protein length: 1081 aa.
Product: TFIID subunit, involved in RNA pol II transcription initiation, putative

>YALI0F32153g_CDS-001 MADEDADWARALGGDPTNVGGVVPSLDGADAIKHSADAIDFEDEDELADDELPEEEEATG
NNVIEEDEEMIVEEEAGLSMSGNDSLGGFQFHIGEDELGGFDLGDDEHWSQSWGGNEMDE
LPVMDEYDDGGVVHAGMLNNNANSNNHVVHAGEPGESDEEMEMEAAGGDGLDMKLDADEL
GELGKLGPADKMDASGFDDIQHMNIQELNLEEIAQMARQADLDMLAMYFPGFQKGKPMKM
NSLFYNKFAVLSLPKPNTARPCVPTKTKLEVAPDERKMTRGTVWVDHAKRRPGVVTVTEA
ETGDDKQELARESRTTQSATDQQLHFDITDWKITWGDEDDGDGDVDMDCEGEKVKEEQKE
VVPQLGVHRNEEAWNDEALFEGDALSQVKKVNLDMNDPNLLFINTDGRVSKNVTPAIPST
ELQLRNRFNLSNDRAYDMLKENTQSKVRATIGNLSIDHSMPALRLQSPFYKVRISKPQAR
SFHRPSFVVKPNTTVHFSRMKIRKKKRDRGKPIKDLLAKTTDLSLGDSAQYFLMEYAEQF
PMTLSNYGMGSKMINYYRKASPEDTSRPKLPVGETHVLSVQDKSPFWNFGFVEPGKIVPT
LYNKMIRAPVFKHTPRDTDFLMIRSTGGDVTGAGQKYFLRNIPHVFTVGQTYPVTDVPGP
HSRKVTTASKNRLKMIVYRVLNASPYHRINVKDIAEHFPDQIDTQNRQRLKEFMEYQRTG
EDQGYWKVKPTDTLPGEDGIRTMITPEDITLLEAMQVGVQNLEDAGYGRTDDIESDHENG
EESGLSLEEQSAPWNLTRNFINATQGKAMLQLHGEGDPSGRGEGFSFLKTSMKGGFQAAG
ESVNEKLDKSKFGGHKYNVAHQQRAYDDEISRIWYAQCRALSNTKVPEENDEDSKWADAE
EQREQQERVSTPGFTSAAFPDDDNMSLMSGDSAMQQRNKVLRITRMVKDEHGIIQRKVET
IKDPSVIRAYIRRRKLMDEAKLTLDDLDPTNDEEANKRNKRLLEERLEDLRKKGERRKQR
QAQKQGLNTINLGTDTPPPSGKGVGKGKGPRQCKNCGAYGHIRTNKSCPMYNQLEGPANL
*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG