YALI0F31515g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0F31515g

Location

Species Yarrowia lipolytica Positions 3915397..3916564
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1168 (nuc.)
Previous locus YALI0F31493g Next locus YALI0F31537g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F31515g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F31515gYALI0F31515g_mRNA-001YALI0F31515g_CDS-001

Nucleotide sequence

 

>YALI0F31515g
ATGCCATCACGACCAATGGCCCAAACCGTGGGAGCCGCCCTCGTTATTGGCGCCGACGAC
ACGTCGCACTACGAAATGACCCGTGATGAGTCCTTTGTCATGTCGGAACAGCGCCGAAGA
GCTTTCATGAGAGCGGTGCCAAACTACTCGTCCTCCACGCTCAACACCGTCGCCAGCGAG
AGCTATTGCATCCCCGAAGACGTTTTGCATGCCGCCGGGGGCACGTCGACTCCAGAGAAG
AAGCTGAACCAGCCCAGACAGCCTTCTGGAAGCCCTGTCCCTTTCAACACACATCATCAG
ACCACGACAACAACACATGCCCAACAACGGGCTGCACCAACTACACAGCATAACAAGAGT
TTACAGAACTCCTCCTCCACATCTACACTTCGAGACTCAGACCTGGACCGCTTCGAGGAC
GCCGAGGAAGACGGAGATGTGTCTCTAGACTCGCCAGACACCTCAGCCGAGGTGTGCGTT
GCCACAGTAGCTAGACTGGCTCCACCTAGTACAGGCACCCGGGGCATTTTCCACAAGAAT
GCAGGCATAGGACATGGTCTCGGTCACCGGCCACAACAGCCCACGGTGGCTCCTCGACCA
CAGACGCACGACCCACGGGCAAAGGTGAAACCCAACAACAACTCGGGGCCCTCCGGAGTA
TATGCTCGTATCAAGATGAAGGAGGTGGAGATCGAGCGACAGTTTGACGCTTTGGTAAGA
CAGACGGTCAAGAGCAAGAAGGAAGGACATGGAGGCATTGCAGCTGAGAAGCCACGAGCC
GCCTCGGACAGTGCATCGATTAGCTCAAGGGAGTCGCACGCATCACGGGCAGACCGAGTG
GCCCAGCTGCAACAGCAGTCGGACAAGCTGTTTGAGTTGTCACGTGCAATCACAGTGGAG
ATTGATCTCATCAAGAAGATGGGGCCGACCACGACATACAAAAACTTCTCTGCCAACACT
GGAGGCAGGTCGACGAATCTGACCCAGAATCTGGCTGACCTGGAAACCAAGAAGCAGGCC
GTGGAACGAGAACTGTACCAAGTCGGCCTGCTGTTGTCTCGTCAGTATATTAAGATGAGA
GAGGAGGGTGCCAGTGAATACTGGGTTAGAAGTGTTTCCAAGTAGGAATAAAGCACAACA
TAATTTAATAACGGATATTAATTGAGGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F31515g_CDS-001

Protein length: 375 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0F31515g_CDS-001 MPSRPMAQTVGAALVIGADDTSHYEMTRDESFVMSEQRRRAFMRAVPNYSSSTLNTVASE
SYCIPEDVLHAAGGTSTPEKKLNQPRQPSGSPVPFNTHHQTTTTTHAQQRAAPTTQHNKS
LQNSSSTSTLRDSDLDRFEDAEEDGDVSLDSPDTSAEVCVATVARLAPPSTGTRGIFHKN
AGIGHGLGHRPQQPTVAPRPQTHDPRAKVKPNNNSGPSGVYARIKMKEVEIERQFDALVR
QTVKSKKEGHGGIAAEKPRAASDSASISSRESHASRADRVAQLQQQSDKLFELSRAITVE
IDLIKKMGPTTTYKNFSANTGGRSTNLTQNLADLETKKQAVERELYQVGLLLSRQYIKMR
EEGASEYWVRSVSK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG