YALI0F30767g

Overview

Description weakly similar to uniprot|P43571 Saccharomyces cerevisiae YFL025c BST1 negative regulator of COPII vesicle formation
Locus type CDS
Locus tag YALI0F30767g

Location

Species Yarrowia lipolytica Positions 3841017..3843948
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 2932 (nuc.)
Previous locus YALI0F30745g Next locus YALI0F30789g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F30767g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F30767gYALI0F30767g_mRNA-001YALI0F30767g_CDS-001

Nucleotide sequence

 

>YALI0F30767g
ATGCGACGGATCAATATCAATGCTAGCGTGGCATTGTGGACCGTGTTCACCATCCTGACG
ATATGGATCTCGTTCGCATTACACCAGCCCGACGTCCAGACATGCGATATAGCGCGCACT
TGGATCTCGACCGCTCATGTTGAAGGTTTCGACTCCAAGCACTCGCGGTTTGGTGAAAAA
TACTCACTACACTTGATTCGAGCGTCTCAGCATGCCATCCCTCAGCCCATTCGACCGTCA
GGAGTGCCCGTCATTTTCGTCCACGGCAACGCTGGAGGGTTTCGCCAGATCGGCCCTTTC
GCTGGCATCGCCCAAGAACTCAACGATGAACTCAGACTACTAACCAAAGGGGACGCAGGA
ACAGAATTCGACTTCTTCTCTATCGACTTCAACGAGGCATACTCTGCTTTGCATGGCCGT
ACCCTGCTTGACCAGGCCGAGTATCTCAACGACGCCATTGCATACATCTTAGACATGTAC
AAGCGTAACCAACAAGAAGGACTACAGGTTCCCGAATCAGTCATTGTGCTGGGACACTCT
ATGGGAGGAATTGTGTCACGTGTTGCGGTTACTTTGGAGAACTACCGACCCCAGAGTGTC
AACACTATTATTACGCTGGCGTCACCTCATCTCATCCCAGCTGCCACCTTTGACGCTGAT
ATCACCAAGGTGTACCATCTAGTCAACGACTATTGGAGAGCGGCATTTGCTGAAGGAGAT
ACCAACGATAACCCTCTCCGAGATATCACCATTCTGTCTATTGCTGGAGGCAAGAGTGAT
ACCATGGTACCATCCGACTATGTGTCTCTAGACTCACTGGTTCCTGCCACAAATGGTCTT
TCAACTTTCACGAATTCCATTGCAAGAGTTTGGACTGGAATTGACCACGATGCCGTCATG
TGGTGTCACCAGCTCCGACGTCAAATTGCGTCAGCACTGTTTCACATTGTTGATCCAAAT
GTCCCAAGCCAGACGAAACCTCGGGAAGTCCGAATGTCTACTTTCCACAGAAGCTTCTCA
GGTTCGCAGTCTCTGTCTAGCGCTATGCAGGATTTTATCAACATTGAGGCGACACCTCTA
CAGGATGGAGTGGAGCAAAGACTGGCCCCAGGCTTCTACTGGGGCCGTAACCTTCAGATG
CTGACTAACCATGTCATCAACTACGACTCCAATATCGACCTGTACGAGCGAAAATCTGGA
AGTCTACTGAAAGTATGGCAGTGTAGATCAAGACAGGGATCTTCTTTTCGACAATGCAAG
AGAATCTACCCCCTTTTTGTTCCGGGGATTAATGATTCCGTTCTCTCACATGTATCCGTG
AACGGTATTCTCTTGTTGGATGTGTCCAAGGAGGCTAGCGAGTCTGGAGACTGGATCAAC
ATTGATGAAACGTCTATGTCAGCTGCTCCTTTTAATATATACGGCAACATCGTCTTCTCT
ACTTCCAACATGGTATCTCAGGATATTGCCTTCCCAGCCCTTACATCTGGCTTGATTTCC
TACAAGGTGCTTACTTCAGGAGGTGTTGGGCTTATCAGACAATATATGGGTCGAAACCAC
CCTAGCCGAACCTATGATTCGAAGTACCTTATCCCTCATTATGCTCGGGTGGACATCTCC
TTCCATGGCGATGGAGCGCCGTTTGTGCCGTTTAAGCTTAAGACGCCAACAAAAACAGAC
CTGTCCACAAAATCGTATAAGGCCCCACTCCATCTCCAAGTGTTTGGACAGGGTAAAGTT
ACAATTTCTGTTGACTATGTTGGGTCCCTAGGCAACCTATTTATGCGATACAGAACACTC
CTGTTCTCACTCCCCACAGCAGTTCTGTATGCAGTTCTTCTGTTGCAGTTTTGGAGATAC
TATCAGTCTGGATCAGATGCCAAGTTTCTCTCCTTGCGAGATGCTACCGGGCTCTTCATC
AAGCAGTACCTTTCCTGGGCATGTCTCGTTGTGGCCGGTCTCAGTTTCGTGATCAAATTC
GAGTTCATCAGAGACTTTCTGCACTTTATTCAGATCCCTGCCACAGGTTCTAGTAAGAGC
TATGAAATCGAAACCTTCTATGGATCACTCTACACGCATATTGATCTGTTTTTGGGTATC
AGCGGGCCTATCGGAGTTGTTCTAGCCCCCGCTTTTCTGGCACTTGCGACTGGTATAGTC
GTAGTTGTTACCGAGATCGTCATTGCCGTCACCACCCTCGCATCGTTGGCCATCTCGAGA
GGACATCGCAAGATGTCGTTACTTCAGACTCCCAAGAACGTGACGATTCAGAGCTCTGAC
GATCCTATTGGGGACCTACTCCACAAACGAACCGTCATCATCGCACTCATGGCCTTGCTG
GTGCTGCTTTTTGTGCCTTACCAGCTCGCATTTGCGCTGGCAACCGCCTCTCTGTTGGCA
CTGACTGCTTACTTTGACGCTGAGGAGTCGGCCTCTGCATCGCACGACCTCTCCACATCT
CTCTATGCCAACAGACAAGCCCAAGAGAAGGTTGGGTCTTTCATTAATTACGCCACAACC
ATGTCTGTGGTCATGGTTTGGACCACTCTAGTCAACATCCCCGTGTTGGCTGTTTGGGTC
CAAGGTATGGTTTTTGGACGATCCACCATATTTTCCTCTCACCACAACCTTCTTTCCGTT
CTTCCTACTTTGTTGTTCATTGAGAACTTGTCCTTCCGACGAATGCCTGAACGTGGCCTC
CCCTTCGTCACATACATCATCCTCGGATACGCGTGTTTCAACTGTACTGCATACGGCATG
ATGCATGCCTTCATGATCCATCACTGGTTCAACCTGCTTGCCGGCTGGCTTCTCATCACC
TCCTACAAGCGCAATAAAACTGTCATCAAGGAAAGCCGCATTGAGTAACACCTCCTTGTG
TGACGCAAAATATAGACTGATACATTTTTCCGTGGCATGATCGTGCTATGTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F30767g_CDS-001

Protein length: 956 aa.
Product: Conserved hypothetical protein

>YALI0F30767g_CDS-001 MRRININASVALWTVFTILTIWISFALHQPDVQTCDIARTWISTAHVEGFDSKHSRFGEK
YSLHLIRASQHAIPQPIRPSGVPVIFVHGNAGGFRQIGPFAGIAQELNDELRLLTKGDAG
TEFDFFSIDFNEAYSALHGRTLLDQAEYLNDAIAYILDMYKRNQQEGLQVPESVIVLGHS
MGGIVSRVAVTLENYRPQSVNTIITLASPHLIPAATFDADITKVYHLVNDYWRAAFAEGD
TNDNPLRDITILSIAGGKSDTMVPSDYVSLDSLVPATNGLSTFTNSIARVWTGIDHDAVM
WCHQLRRQIASALFHIVDPNVPSQTKPREVRMSTFHRSFSGSQSLSSAMQDFINIEATPL
QDGVEQRLAPGFYWGRNLQMLTNHVINYDSNIDLYERKSGSLLKVWQCRSRQGSSFRQCK
RIYPLFVPGINDSVLSHVSVNGILLLDVSKEASESGDWINIDETSMSAAPFNIYGNIVFS
TSNMVSQDIAFPALTSGLISYKVLTSGGVGLIRQYMGRNHPSRTYDSKYLIPHYARVDIS
FHGDGAPFVPFKLKTPTKTDLSTKSYKAPLHLQVFGQGKVTISVDYVGSLGNLFMRYRTL
LFSLPTAVLYAVLLLQFWRYYQSGSDAKFLSLRDATGLFIKQYLSWACLVVAGLSFVIKF
EFIRDFLHFIQIPATGSSKSYEIETFYGSLYTHIDLFLGISGPIGVVLAPAFLALATGIV
VVVTEIVIAVTTLASLAISRGHRKMSLLQTPKNVTIQSSDDPIGDLLHKRTVIIALMALL
VLLFVPYQLAFALATASLLALTAYFDAEESASASHDLSTSLYANRQAQEKVGSFINYATT
MSVVMVWTTLVNIPVLAVWVQGMVFGRSTIFSSHHNLLSVLPTLLFIENLSFRRMPERGL
PFVTYIILGYACFNCTAYGMMHAFMIHHWFNLLAGWLLITSYKRNKTVIKESRIE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG