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  6. YALI0F30745g

YALI0F30745g

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Overview

Description similar to uniprot|Q9HFV0 Yarrowia lipolytica C1- THFS protein
Locus type CDS
Locus tag YALI0F30745g

Location

Species Yarrowia lipolytica Positions 3836044..3839285
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 3242 (nuc.)
Previous locus YALI0F30723g Next locus YALI0F30767g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F30745g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F30745gYALI0F30745g_mRNA-001YALI0F30745g_CDS-001

Nucleotide sequence

 

>YALI0F30745g
ATGTGCCAAAACCTAATTAGGTGGAGGTTAAAGTATGAAAATATTCTCTGGAGTCATCTT
TTAGCCAACTACACCACCAGTCTAGTCTATCACCAACTACTTATGACCATGTCGCGTCTG
GTTCGACGGCTTCCTGGCCGAATTCCCACTTTTCGAGTGGCCCATTCGCTCAGCTTGTCT
GCTCTTCGTCACTATGCCACTGCCACCAACATTGACGGCAAGCAAATGGCAAAGGACATT
CGACTAGAGCTCCACGACGAGATCAAGCAGATTCAGGCTAAGAAACCCCATTTCCAACCC
AAGCTGATTATAATTCAAGTCGGCGAGCGTCCCGACTCTAGTGCCTACGTGCGTATGAAG
CTCAAGGCTGCTCGAGAGGCCCAGATTGACTGCGAGCTGCGAAAGTTCTCCGAGGACATG
GCCGAGGACCACCTTCTGGAGGAATTGGACATCCTGAATGACGATCCTTCCGTTCACGGT
ATTCTTGTCCAGCTGCCTCTTCCCAAGCACATCAACGAGACCCGAATCACCGATTCTGTC
ATCACTGCCAAGGACGTTGATGGTTTTGGCCCCCTCAACGTTGGAGAGCTTTCCAAGCGG
GGTGGAAACCCCGCCTTCGTTCCCTGCACCCCCAAGGGTGTCATGGAGATGCTGGATCGA
TCTGGCATTGAGCTGCGAGGCAAGAATGCCGTTGTCATTGGCCGATCCGATATTGTCGGT
ACCCCCGTCGCCTCTCTCCTTAAGGGCGCTGATGCCACCGTCACCGTCTGCCATAGATAC
ACCGAGAACCTTCCTGCCATTGTCAAGAACGCCGATGTCGTTGTTGCTGCCATTGGAGCT
CCTAACTTTGTCAAGGGCGAGTGGCTCAAGCCCGGCGCTGTCGTTGTCGATGTTGGCATC
AACTACGTCAAGGATGAGACTAAGAAGTCCGGTCAGCGACTTGTCGGAGACGTTGACTTT
GACTCTGCCAAGGAGGTTGCTTCTTTCATTACTCCCGTTCCCGGAGGAGTGGGTCCCATG
ACCGTGGCCATGCTGGTCAACAACGTGGTCACTGCCGCAAAACGACAGTCCCTCGAGCAA
CAGAAGATGCAGGTCAAGCCCCTGCCTCTCAAACTGCGAACGCCCGTTCCTTCTGACGAT
GCCATCTCTCGAGCACAGATCCCCAAGAACGTCAAGACAGTTGCCAAGGAGGCCGGACTC
ACCGAGCACGAGTTTGAGCCCTATGGAGCTTACAAGGGTAAGGTCTCTCTGACAACCTTG
GACCGACTCAAGGACCGAAAGGACGGTAAGTACGTTCTTGTGGCCGGAATCACCCCCACT
CCTCTTGGAGAGGGTAAGTCTACCACCACCGTTGGTCTTGTTCAGGCCATGTGTGCCCAC
CTCGGCAAGCTAGCCTTTGCTAATGTCCGACAACCCTCCATGGGTCCCACTTTTGGTATC
AAGGGTGGTGCTGCCGGTGGCGGATACGCCCAGGTCATTCCCATGGACGAGTTCAACATG
CATCTGACTGGTGACATTCACGCCATTTCTGCTGCCACCAACCTGCTGGCCGCCGCTATT
GACACCCGAATGTTCCACGAGTCGTCCCAGAAGGACGCCGCTCTTTACAAGCGGCTGGTT
CCCTCCGTCAAGGGCAAGCGACAGTTCATTCCCTCGCAGCTGCAGCGACTAGAGAAGTTG
GGCATCAACAAGACTAACCCCAACGACCTGACTGATGAGGAAATCAGCAAGTTTGTTCGA
CTTGACATCGATCCTGAGACCATCACCTGGAAGCGGGTTGTCGACTGCAACGATCGACTT
CTGCGAGGTATCACCGTTGGAGAGGGCCCCAGCGAAAAAGGCCGAACCCGAGAGACTGGA
TTCGACATTTCTGTCGCCTCTGAGTGTATGGCTATTCTCGCTCTGTCCAACTCTCTCGCC
GATATGAGACGACGACTTGGAAACATGGTGGTTGCCTCTTCTCGAGAGGGCCTTCCCGTC
ACTTGTGACGACATTGGAGCTGGCGGAGCTCTCACTGCCCTGATGAAGGATGCCATCAAG
CCCAACCTCATGCAGACCCTGGAGGGAACCCCCGTCTTCGTGCATGCCGGTCCTTTCGCC
AACATTTCCATTGGTGCTTCTTCTGTCCTCGCCGATAAGATTGCTCTCAAGTTGGCTGGT
ACCAAGACAAAGGGCGACGAGCCCGGTTACGTGGTCACTGAGGCTGGTTTCGACTTCACC
ATGGGTGGAGAGAGATTCTTCAATATCAAGTGCCGAGACTCCGGTCTTGTTCCCGACGCC
GTTGTCATTGTCGCAACTGTTCGAGCCCTCAAGCTGCACGGTGGAGGACCCGAGGTTAAG
CCCGGTGCCCAGCTCGCCCCCGAGTATCAGAACGAGAACGTTGACCTGGTTACTGCTGGT
GCCAAGAATCTCGGCAAGCAAATTGAGAACGCCCGATCTTTCGGTGTTCCCGTCGTTGTC
GCCATTAACCAATTCGCCACAGATACTCCTGCCGAGATTGAGGCCATCCGAACTGCTGCT
CTCAAGGCTGGTGCCGCCGAGGCCATTGTCTCCAACCATTGGGAAAAGGGTGGAGAGGGA
GCCATTGATCTCGCCAAGGGTGTCGTCAAGGTTTGTAGCCAGACTGACAACGTCGAGAAG
AACCCCAACTTCAAGTTCCTTTACGATATCGACACCTCTGCCGAGGAGAAGCTCAACACC
ATCGCCAAGGAGATGTACGGTGCCAAAGGCATTGAGCTGTCGCCTCTCGCTCGAAAGAAG
ATTGACACCTACACTGCCCAGGGCTTTGGAAACCTTCCCATCTGCATTGCCAAGACCCAG
TACTCTCTGTCACACGACCCTGCCCTCAAGGGTGTACCCAAGGACTTCGTCGTGCCCATT
CGAGACGTGCGAGCATCTGTTGGTGCTGGTTACCTCTATGCTCTGGCTGCCGACATTATG
ACCATTCCTGGTCTGCCTACTAGACCTGGCTATATGAACGTCGAGGTCGACTCCAAGGGC
CAGATCGAGGGTCTGTTTTAACCAAACAACAAAAACCAACAACAAAAAACACAATCAGGG
GACGTCGGTGCGTAAGGCACTTATTCAACATTATTAGACATTGTTCAACCTAACATTATA
CAGAGAATAGATATTTTAGATATATTAGACCCTAAGAGACTGTCACCTCTCTCTATATAT
CTGTATAGAGCTAACCACGGTATTGGGGTCCTTTTGTAACCACTGAATGTTGGTTTTATC
AT

Legend

Locus sequence
Up/downstream sequence

Edit sequence

Translation(s)

YALI0F30745g_CDS-001

Protein length: 1007 aa.
Product: C1 tetrahydrofolate synthase

>YALI0F30745g_CDS-001 MCQNLIRWRLKYENILWSHLLANYTTSLVYHQLLMTMSRLVRRLPGRIPTFRVAHSLSLS
ALRHYATATNIDGKQMAKDIRLELHDEIKQIQAKKPHFQPKLIIIQVGERPDSSAYVRMK
LKAAREAQIDCELRKFSEDMAEDHLLEELDILNDDPSVHGILVQLPLPKHINETRITDSV
ITAKDVDGFGPLNVGELSKRGGNPAFVPCTPKGVMEMLDRSGIELRGKNAVVIGRSDIVG
TPVASLLKGADATVTVCHRYTENLPAIVKNADVVVAAIGAPNFVKGEWLKPGAVVVDVGI
NYVKDETKKSGQRLVGDVDFDSAKEVASFITPVPGGVGPMTVAMLVNNVVTAAKRQSLEQ
QKMQVKPLPLKLRTPVPSDDAISRAQIPKNVKTVAKEAGLTEHEFEPYGAYKGKVSLTTL
DRLKDRKDGKYVLVAGITPTPLGEGKSTTTVGLVQAMCAHLGKLAFANVRQPSMGPTFGI
KGGAAGGGYAQVIPMDEFNMHLTGDIHAISAATNLLAAAIDTRMFHESSQKDAALYKRLV
PSVKGKRQFIPSQLQRLEKLGINKTNPNDLTDEEISKFVRLDIDPETITWKRVVDCNDRL
LRGITVGEGPSEKGRTRETGFDISVASECMAILALSNSLADMRRRLGNMVVASSREGLPV
TCDDIGAGGALTALMKDAIKPNLMQTLEGTPVFVHAGPFANISIGASSVLADKIALKLAG
TKTKGDEPGYVVTEAGFDFTMGGERFFNIKCRDSGLVPDAVVIVATVRALKLHGGGPEVK
PGAQLAPEYQNENVDLVTAGAKNLGKQIENARSFGVPVVVAINQFATDTPAEIEAIRTAA
LKAGAAEAIVSNHWEKGGEGAIDLAKGVVKVCSQTDNVEKNPNFKFLYDIDTSAEEKLNT
IAKEMYGAKGIELSPLARKKIDTYTAQGFGNLPICIAKTQYSLSHDPALKGVPKDFVVPI
RDVRASVGAGYLYALAADIMTIPGLPTRPGYMNVEVDSKGQIEGLF*

Neighborhood

Browse the locus neighborhood with JBrowse:

References

There are no reference.

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ATG