YALI0F30525g

Overview

Description weakly similar to uniprot|P48561 Saccharomyces cerevisiae YNL299W (ohnolog of YOL115W) TRF5 nuclear division protein
Locus type CDS
Locus tag YALI0F30525g

Location

Species Yarrowia lipolytica Positions 3816829..3819085
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 2257 (nuc.)
Previous locus YALI0F30503g Next locus YALI0F30547g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F30525g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F30525gYALI0F30525g_mRNA-001YALI0F30525g_CDS-001

Nucleotide sequence

 

>YALI0F30525g
ATGTTCTCCGAAGTATTGTCACCAATGGCAAAACGAACAACTAAGCTGCCGCCAGCTACA
GTGGCTACAAAGGCGGATTTGAGGAACCGCCCTATCGCACAGCCTGTGAGTCGGCGTAGG
GGCCAACAAGCAACGCCTAACAACGCCAACAACAACAGCAATAACAACAGCGCGGAAGAC
AAAAGTAACAACACAAATGATACCAAGGACAGCAAAGATGGCAAGGAAAAGGCCAGCAAG
AAGAAACGAAAGAAGAACAAGAAGAAGAGCCAATCGGGACCCATTAGTCCGCAGGACCGT
CGAAACTCTGGAAACGGATACAACGTCCTGGTAGACGAGAATGACGACAAATCTGGAGAT
GAGGGAGAGAGAAGCTCTAAGAAGAGAAGAACTGCGGGATCTGCTGCATCGACCACCGCT
TCTTCAGATATGGACAGCGAAAATGAGAGATCGGTCTCCACAGCACCTACATCTGCCCCA
GCTCCCAAACCTCCTGCTGACTCTCCTCCTCCTCCACCACCAGTTGATCCCAGTGAGTGG
AACATGAACGAGGATTTTGTCGGGTTTGATTTTTCGGATGGTGAGGATGAGGAAGACGAA
GAGCCAGAGGAGCCCGTCAGATCGCGTAAGCGAACTATCGAGGAGGTGGACGATGCAAGT
TCAGGACCTGCTTCCAAGAAACAGGACCTTGAGGCCCCATGGATCAAGTCAAACTACCAT
CAATACGACCGTGTGTCTGATTGGTTGCAGGAGGAAGTGATGGACTTTGTCAAGTACATT
TCTCCCACTCAGTCGGAGATAAAGGCACGTCAGGATCTGGTGGAGCGTGTTCGAGGGGCC
GTGAACGGCCTGTGGGGAGACGCGAAGGTGCACGTACTGGGATCATTCACTACCAACATG
CACCTGCCTCAGAGTGATATTGATCTCGTCGTCTGCAGTCCTCACGGACACTACGGCGAG
AGAGCTTGCATTTACCAGCTCAGCAGTGTCATTCGAAGCCGGATGAAGGTTGCGGAGCTC
CAGACTATCACAAAGGCCAGAGTGCCTATTATCAAGTTCATCGACTCGAGAACGGGCGTC
CATGTGGACATATCGTTTGAGAAGGACGGAGGAATCAAGACTGCATCTACCATCACGAAA
TGGAGCAAGAGCATGCCTGCTCTTCGACCCCTGGTGTTGATTGTCAAACAGTTCCTGTCG
AGTAGACGACTTAACGAGGTCTTCACAGGTGGTCTGGGTGGATTTTCAGTCATTTGCATG
GTGTACTCGTTCCTGATTCAGCATCCCCGAATTTCGACGGGCGACATTAGCCCCATGGAC
AACCTTGGAGTTTTGTTGATTGAGTTCTTCGAGCTCTACGGTGTCAACTTCAATTACGAG
CGTGTTGCTCTCAACATGGATGGTAACTGTGGTTACCTTAGCAAACGTTTGTACCCTGAT
CTCATTGGTCGAAACCCCTTTGCCGTGGCAATCCGTGATCCTGATGATCATGAGAACAAT
ATTTCCCAGGGAACCTTCAACATGCGAAATATCAAACGTGCCTTCAGCGGTGCATTCCAA
CTGCTGTCGGGTAAGTGTCTTGATATGAACAAGACTGGATATAAGGGACGCCAGGGGAAG
AGTTTACTGACATCCATCATCAAGCTGAAGGGTCCTGTCCGAGACCAGACCCCTGATGCA
ATTACCGAACCTCTCAAGTACACAGGTGGAGGGGATGAGTTCAAGATCCCTCAGGACGCT
GTGTACAACTCCGTGCTAATGAACGATGAGGACGAGGATGAGAAGGCTAAGCAAGCAGAA
GATGCTGACAAAACAAAGAGGCGTGCTGCCCAGAGGGAGGAGCAGAAAAAGAAGAAGGAG
TTGACTACTGCATCAGATGACAAGATTCCCAAGGGTCCAGCAGCAGATAGAAACCAGCCC
AAGGCCGATCAGAGAAAAATGTCCAAGGATAGAGCCGCTGCACGAGCTGCTGCGCGTGAG
GTGATGGAGATTTCGAGCGATGACGACGACGGTTCCGACAGCAAGAATGGTGGAGCTAAG
AGCAATCCCATTGACTTGTCGTCGGATGAGGAGAAGGGTCGATCTGACATCAAGAAAGAT
CCTTCGGCCAAGCGACGATTCTGGCAGCAGAAAGGAGGACTGGATTACTAGCGAGGTGCG
GAGACAGAGATAGAATAATGTAAATTAATGGCGTTACCTACACACGCTTCACACAAGGCA
ATCTGAATATACTAATAACATTGCAAATTAAATGTAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F30525g_CDS-001

Protein length: 717 aa.
Product: Conserved hypothetical protein

>YALI0F30525g_CDS-001 MFSEVLSPMAKRTTKLPPATVATKADLRNRPIAQPVSRRRGQQATPNNANNNSNNNSAED
KSNNTNDTKDSKDGKEKASKKKRKKNKKKSQSGPISPQDRRNSGNGYNVLVDENDDKSGD
EGERSSKKRRTAGSAASTTASSDMDSENERSVSTAPTSAPAPKPPADSPPPPPPVDPSEW
NMNEDFVGFDFSDGEDEEDEEPEEPVRSRKRTIEEVDDASSGPASKKQDLEAPWIKSNYH
QYDRVSDWLQEEVMDFVKYISPTQSEIKARQDLVERVRGAVNGLWGDAKVHVLGSFTTNM
HLPQSDIDLVVCSPHGHYGERACIYQLSSVIRSRMKVAELQTITKARVPIIKFIDSRTGV
HVDISFEKDGGIKTASTITKWSKSMPALRPLVLIVKQFLSSRRLNEVFTGGLGGFSVICM
VYSFLIQHPRISTGDISPMDNLGVLLIEFFELYGVNFNYERVALNMDGNCGYLSKRLYPD
LIGRNPFAVAIRDPDDHENNISQGTFNMRNIKRAFSGAFQLLSGKCLDMNKTGYKGRQGK
SLLTSIIKLKGPVRDQTPDAITEPLKYTGGGDEFKIPQDAVYNSVLMNDEDEDEKAKQAE
DADKTKRRAAQREEQKKKKELTTASDDKIPKGPAADRNQPKADQRKMSKDRAAARAAARE
VMEISSDDDDGSDSKNGGAKSNPIDLSSDEEKGRSDIKKDPSAKRRFWQQKGGLDY*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG