YALI0F30327g

Overview

Description some similarities with uniprot|P38818 Saccharomyces cerevisiae YHR109w CTM1 cytochrome c methyltransferase
Locus type CDS
Locus tag YALI0F30327g

Location

Species Yarrowia lipolytica Positions 3789924..3791323
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1400 (nuc.)
Previous locus YALI0F30305g Next locus YALI0F30349g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F30327g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F30327gYALI0F30327g_mRNA-001YALI0F30327g_CDS-001

Nucleotide sequence

 

>YALI0F30327g
ATGAACTGGATTAAGGAAGGAAAAGTGACGCTCACAAACACAGAGATTTTTGAGTCTCCT
GGAAAGGGCAAAGGGCTCAGATTCACCAAAGACAATGTCTCCGGTATTGTTCTGAGAGTC
CCCAATGATCTGCTCATTAACGCCGAACATGTATCCGCCTGGACCGAGGAGAACAAATAC
CTCACCGGAGAGCATTTGGAGTTTATGAAAGCGTCATTGGAATGGCTAAAATCTGAGAAA
GATGTCATTGTGCTGTTCATGGCCCTGCTGGCTTCTCAGAGCTCATCTGGTATGAGCGAT
TATGTGTCTTCTCTGCCCAAAAGTACGGAGATGGACCAGCCCTGGTCTTGGCCCGAGACT
GAGATCTTTGATAGTCTCAAGGGAACCTCTCTCCTCATGGCGTGTGTTCACAAGAAAATG
CATGTGCAGGCAAAATATTTGGCAATTGTCGGCAAGAAAGGAGGAGAGAAACTAGTTTCA
GAGCAACAGTTCTATTTATCCGAGCAATGGGTTGTGTCTCGAAGCCTGGAAATTCCTGAG
TCTCCTGGATCTGAAACGCTGGCTCTGACCATGGTCCCTGTTCTTGATTACGTCAACCAC
TCACCCAAGGCAAATTGCCGATTTGAAGTAGACAGTGGAGAGGTGGTTTTAATTGTCAAT
GAAGATGTGCTAATTAAGGCTGGCGATGAGGTCTTTATCAACTACGGACCTGATAAGAGT
GCCGCAGAGTTCCTTTTCTGCTATGGCTTCATTGATGCTGCTCACGGGGTCACCAAGAGC
ATTACCCTTGAGACTCCTCTCATGCTGTCTATGGATGAGATTGATCCCGAGTATCTCATC
AAGAACCCCGACTGCGACGCCGAGCTCAAGAGCATGATTCTCAAGTTCCATAGCTACGGA
GCTCGATCTAGACTCATCAAACTGGAGGCTCTGAATGACGGCGAAGACATCATTGCCAAG
GTCGACTGTGACTGGTTGTGGATGCTTACCCTGCCCGTGGAAGATCTCAAGATCGACGAG
ACTACTGCAGCTGCTGAGTTCAAGGGAAAACCTCTCGTTCGAACCAAGACTGTTCGCGCA
CAGCTCAAACAGATTCTGGGAGATGATCTTAACGAATACATCACCCAGACCAGCAGCATG
AAAGAGGACATCGGAGACTACGTCGGCCATCTGGTGAGAGAGGTGTTTATTCCCCAGCTC
GATGTTGAGGCTAAAAGCAGTCACCCCATGGCCGAACGTCTCAGACAGATGGAAAAGTCC
TTCCTCCAGTCTATTGATGACATTGAGGTTTAGTCGTTGCCTACATCGACAGTTCATTGT
AAATAGAATTAAATTTGACATGTTGACTGATGGCAACCGTAAGTATCTATCCAGTGGCTG
CTTAAAGCCTTTTTCTTTTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F30327g_CDS-001

Protein length: 431 aa.
Product: Conserved hypothetical protein

>YALI0F30327g_CDS-001 MNWIKEGKVTLTNTEIFESPGKGKGLRFTKDNVSGIVLRVPNDLLINAEHVSAWTEENKY
LTGEHLEFMKASLEWLKSEKDVIVLFMALLASQSSSGMSDYVSSLPKSTEMDQPWSWPET
EIFDSLKGTSLLMACVHKKMHVQAKYLAIVGKKGGEKLVSEQQFYLSEQWVVSRSLEIPE
SPGSETLALTMVPVLDYVNHSPKANCRFEVDSGEVVLIVNEDVLIKAGDEVFINYGPDKS
AAEFLFCYGFIDAAHGVTKSITLETPLMLSMDEIDPEYLIKNPDCDAELKSMILKFHSYG
ARSRLIKLEALNDGEDIIAKVDCDWLWMLTLPVEDLKIDETTAAAEFKGKPLVRTKTVRA
QLKQILGDDLNEYITQTSSMKEDIGDYVGHLVREVFIPQLDVEAKSSHPMAERLRQMEKS
FLQSIDDIEV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG