YALI0F30305g

Overview

Description similar to uniprot|Q05775 Saccharomyces cerevisiae YLR192c HCR1 component of translation initiation factor eIF3
Locus type CDS
Locus tag YALI0F30305g

Location

Species Yarrowia lipolytica Positions 3788755..3789690
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 936 (nuc.)
Previous locus YALI0F30283g Next locus YALI0F30327g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F30305g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F30305gYALI0F30305g_mRNA-001YALI0F30305g_CDS-001

Nucleotide sequence

 

>YALI0F30305g
ATGGCCAGCTGGGACGACGAAGACTTTGAGGTGCCTGCCGCTGCCACCCCCGCAGTCCCC
GCCAACTGGGATGACGACGAAGAGGAGGACGTCATGGACTCCTGGGATGCTGAGGAGCCC
ACCAAGGCACCCGGACCCAAGACCACCGTGGCTGCCCCCAAGAAGGCCCAGCGACAGCAG
ATCGCCAAGATCGAGCGAGAGATGGCTGCCATGAAGCTCAAGCCTGAGGATGCTTCCACC
AAGCGAGACCGACAGCGACAGGCCGAGCTCGACTCCGACATGATGAACGCTTCTGAGCTG
TTTGGTGGCACTGGAGGTATTGCTGACAGCGCTGCAAAGGCTGAGGCCGCTCCTGCTCCC
GCTGCCCCTGCCGCTCCCATGAAGTTGTCGGATCTGGCAATCTTCCACCCCAAGGAGAAG
AAGGACTTCACCAACCTCAAGGAGACTCTGGCCCCCATCCTCACAGACCTTAACAAGACC
AGCCCACTGGCCTACCCCGACTTTGCCATCACCTTCACCAAGGCTCTGGCTGAGCCCCTC
AAGGTCGAGCAGCTCCGAAAGCTCATCTCTACCCTGAACGCTTACCAGAATGAGAAGATT
CGAGAGGAGAAGGCTGCTCGAGGTAAGAAGAAGAAGCCCGGTCTTGCTGCTGCCTCCGCC
AAGATCAATGACGATAAGGATACTTCTACCTTCAACGACAACTTCGATGATTTTGACGAT
TTCATGTAAGTGGACTCGGAATGCGGATTTGTGCCACTGGGGTGGCTGCGGTATGCTTTT
GACCTGATTGCTACATTTGGCAAAGGGTCTCTAACGCATATGCAGACGGACCTTTGTTAG
AGGTGGTGTAATGTAATGTTTGATGACCTGCCATGCCATGGTACTTCAGACGTCATGTAG
TTAATATTATGTAGTCTGGTGCGAACAAGATGGAAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F30305g_CDS-001

Protein length: 243 aa.
Product: eIF3j component of translation initiation factor 3 (eIF3), putative

>YALI0F30305g_CDS-001 MASWDDEDFEVPAAATPAVPANWDDDEEEDVMDSWDAEEPTKAPGPKTTVAAPKKAQRQQ
IAKIEREMAAMKLKPEDASTKRDRQRQAELDSDMMNASELFGGTGGIADSAAKAEAAPAP
AAPAAPMKLSDLAIFHPKEKKDFTNLKETLAPILTDLNKTSPLAYPDFAITFTKALAEPL
KVEQLRKLISTLNAYQNEKIREEKAARGKKKKPGLAAASAKINDDKDTSTFNDNFDDFDD
FM*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG