YALI0F30107g

Overview

Description some similarities with uniprot|I2FY90 Ustilago hordei UHOR_04960 Uncharacterized protein
Locus type CDS
Locus tag YALI0F30107g

Location

Species Yarrowia lipolytica Positions 3769388..3770098
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 711 (nuc.)
Previous locus YALI0F30085g Next locus YALI0F30129g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F30107g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F30107gYALI0F30107g_mRNA-001YALI0F30107g_CDS-001

Nucleotide sequence

 

>YALI0F30107g
ATGACTCAGGGTATAAAAGGTATGAACCTGCTCGGAGATGGCAACAAAAACAGCCACCTT
GGAAACGGCGGGAAATTAGACCACCCCAACGCAGAAAACGGCATGAACTTGTTCCGACAA
ATGACAGAAACAGACATGAAACAGACGGAACGGGTCCAGTCACCCACGTCGCCCAGTCCA
AACTCCACCAACAGAATCGCATGTGTATCTCCTCCACACATGGTCCAGCTCCAAAGTCTC
ACCAGCACTCCTCAAGGACCCCACACTCCAAGAGACACTCCATGTATTACACCCTCCGTG
TATTCACCAACGAGGGACGGAGCACACCTTTCCGAGGCCGAGGGAGCCCGAATCACCCGC
CAAATTGAAGACCTGAAAATTACGAACATGACTCTCACCCAAATCAACAAGGACCTCGAA
GCTCAGGTGCGAAAACAACAGCAGGAACTGAAACAGCTCCGAGAGCGGCGCCCGAGTAAC
TCAGAGATAATGTCCGGCGAGTACGAGTCCAACTTGGATCACATTGATGTTTCAAGTGAA
CTCAGCTCTACCACTCAATCACTTCTGGAGGCTATGGGAGTCAAGGGGATCGGTAGACCC
ACCCAACTGGATAAGTGTTTAGAGTTGAGCACCACCCTGTTACAGGAGTATTCCGAGGCT
GTGCATTCGGTTTCCAACGTGGATGTCGGTGTCCGAGTCAAGGGATTATGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F30107g_CDS-001

Protein length: 237 aa.
Product: Hypothetical protein

>YALI0F30107g_CDS-001 MTQGIKGMNLLGDGNKNSHLGNGGKLDHPNAENGMNLFRQMTETDMKQTERVQSPTSPSP
NSTNRIACVSPPHMVQLQSLTSTPQGPHTPRDTPCITPSVYSPTRDGAHLSEAEGARITR
QIEDLKITNMTLTQINKDLEAQVRKQQQELKQLRERRPSNSEIMSGEYESNLDHIDVSSE
LSSTTQSLLEAMGVKGIGRPTQLDKCLELSTTLLQEYSEAVHSVSNVDVGVRVKGL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG