YALI0F30085g

Overview

Description similar to uniprot|B2AWZ8 Podospora anserina hypothetical protein
Locus type CDS
Locus tag YALI0F30085g

Location

Species Yarrowia lipolytica Positions 3768155..3769191
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1037 (nuc.)
Previous locus YALI0F30063g Next locus YALI0F30107g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F30085g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F30085gYALI0F30085g_mRNA-001YALI0F30085g_CDS-001

Nucleotide sequence

 

>YALI0F30085g
ATGGTGTTTTTCGGCAAAAAATCGCCAATCACGGGGAAACAAAATGCACGAAAAACAACT
GGGCTCAAGGCCGCATCCACGCGCTCAATTATCAACAAGTACCACCAGCTGAACAAGCGA
AAGTTGCAACTACAGGGGCTGAAGAAACGAATGAAGAAAGCAGAGGAGCAGGCAAAAGAG
GCGGAAATCGACGCTGAAATAACACAAATCGACTCTGAAATGGAGAAATTGGGCGGCCTT
GAAGTGTACCAGAAGGCGTCTCTCAAGGGCCAAGATCAGACTAGAGGAGGAGACTCATCA
CACGTTCTGCTCAAGTGGCTGAAGAACGAGGGAAACGAACTTGCACTCGAGGAGGGTCAG
GAGAAGAAGCTGCTGGAAGTTGGGTGCCTGTCTGTGTCTAATGCTGTGTCTAAATCAACC
GAGTTCGACACGATAGACCGGATCGATCTGAGATCGAATGATCCGCTCATAAAACAGCAG
GATTTCCTGAAACGACCGCTTCCCAAGAGCGATCAGGAGAAGTATCACGTGATCTCATTA
TCGCTGGTGCTCAATTTTGTGCCTGTTACAGCTGACAGAGGCAAGATGCTCCAGCTGACC
ACCAAATTTCTGCATCCCCAAGGTCTTCTGTTCTTTGTGCTGCCCAAGGCATGCGTGGAG
AACTCCCGGTATCTTGATGGCGAGCTGTTCGACTCCATTATGGCGTCATTGGGCTACGAG
AAACTTGAGGAGACTACAACCGATAAGCTGATCTACCAGCTGTGGAGATGTCGCCAGGAG
AAGGCCAAATATCAAAAGTTCACCAAAAACGAGGTGCGAAGTGGTTCTACGCGGAACAAC
TTTTGCATTACGTTGTGAGGTAACTTGATAAGAGGATGCACGACTGTGTTTATGATGTAA
TTATAAGGAATAGGAGTACTAACTTAGTAGAGATGGTAGTAAATACTATTTCATAAGCCA
GCACAAGCTCACTATTATGTGAGAGTTGATGAGGCCTAGATCGTACTGTGTACTTGTAAT
ATATATATTATATTAAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F30085g_CDS-001

Protein length: 286 aa.
Product: Conserved hypothetical protein

>YALI0F30085g_CDS-001 MVFFGKKSPITGKQNARKTTGLKAASTRSIINKYHQLNKRKLQLQGLKKRMKKAEEQAKE
AEIDAEITQIDSEMEKLGGLEVYQKASLKGQDQTRGGDSSHVLLKWLKNEGNELALEEGQ
EKKLLEVGCLSVSNAVSKSTEFDTIDRIDLRSNDPLIKQQDFLKRPLPKSDQEKYHVISL
SLVLNFVPVTADRGKMLQLTTKFLHPQGLLFFVLPKACVENSRYLDGELFDSIMASLGYE
KLEETTTDKLIYQLWRCRQEKAKYQKFTKNEVRSGSTRNNFCITL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG