YALI0F29711g

Overview

Description weakly similar to uniprot|O94343 Schizosaccharomyces pombe SPBC1271.10c Uncharacterized MFS- type transporter
Locus type CDS
Locus tag YALI0F29711g

Location

Species Yarrowia lipolytica Positions 3727977..3729719
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1743 (nuc.)
Previous locus YALI0F29689g Next locus YALI0F29733r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F29711g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F29711gYALI0F29711g_mRNA-001YALI0F29711g_CDS-001

Nucleotide sequence

 

>YALI0F29711g
ATGTCCAAACAGCCAAGAGATCCTCCAAAGGTCAATATACCACCACTCTCTAAACGATCT
CCAGGATGCCCTTTACGTCCTACACAGAGCTCCCATGAGACAGACGTGCTCGGGGAACAG
ATTCAAGGTTCCCTGGTAAAAGCGTCCAAGGAGGACTACCCAGGGTATCTGAAGACTGGC
CCTCAGTCTACTAGAAAGGAGTCTTTCTTCGATCCGGACTTCAAGGTCATCTCCATTGAA
ACTGGCGTTGTTGGTTCTAAAGATGACATATCACCCGGCTCTGAACCTCCTGGCACAGTC
CTTCTGGAAACAACCCTCAACAATACCACTCGTCACCCAACTCCCTCTTCAGACCCCAAT
GATCCACTCAACTGGAAACCATGGAGAAAGGCGCTGAACTTCTTCCTCGTTCTGTTCTTC
ACGGTTGTGGCTTTCTCATGCAATTGTGTGGCTACAGCGTTCTGGGGACAACTCAACACA
GAACTAGGCTTCTCCTTTGATGAGCTGAACAACGGGTTTGCTCTGGGCATCGGAGGTCTT
GGAATCGGGTGTCCATTGTTTGTGCCTATCGCTGTAAAGTTCGGAAAGAGACCAGTTTAC
CTAGTCGCCACGATTCTTGTGATCGTTGCCACCTTCTGGCAGGCAAGGATGAAGTACCTT
CACGATTACTACGCTGCTTCTTTTCTCGAAGGACTGGCTACGTCGCTCTGTGAAGCCATG
ATTCAGATGACTATTGCTGATCTGTACTTTGTTCATCAGAGAGGAACCATGAATGGCATC
TTCATGATCATCATTGCCATCTCCAACTTCCTGTCCCTGGTTCCCGCAGGCTATATTGCT
ACCAACATAAACTGGAACACCTGCTTCTGGATCTTGGGAGGTCTAGGGAGTGGTTTCTTG
ATAGTTTCCGTATTCTGCTTCGAAGAGACCAAATTTGAGCGAGCAGAGGATGATCCAAGA
GATATACATGAACTCCATCCACCTCAAGGCAAGATGAAGTGGCAACTAAGACCTTACACT
ATCACTACTGGGTCATGGGGTGACTTCTTCAAGACATTCTACACACCTTTTGTCGTTTTA
ATCTCGTTTCCGATTGTTCTCTTTGTAACCTTGCACTACACATTCATGCTCACCTGGCTG
GCAATGTGTGCTACCACTCTTGCAAACTCGTTCACTCAACCTCCCTATGAGTTCTCCCCA
GAAGCAATTGGAAACATGAACATAGCTCCATTTATTGGTCTGTTAATTGGCTCTTTCTAT
GGAGGCTGGCTTAATGACAAAAGCATGTTGTATCTCACCAAGCGTAACCATGGAGTCTAT
GAACCAGAGATGAGACTCTATATGCTCATTCCCATGTGCCTCATAATGACCGCCGGCGTA
TTCATGTTTGGGTTGTCTATTGCCACTGGAACACATTGGGCAGTTCCAATGGTCGGACTG
GGTGTTTTTGCAGCTGGTTTTGGGGCTAATGGAAGCATCACACTCACTTACCTCATTGAC
TGTTACAGGGATATGATTTCTGATGCCTTCATTGGTATTGTTGTGGTCAGAAACATCATG
TCTATGGTTGTTACTTTCTGTCTTTCACCTTGGATTGATTTGAATGGTCTCAGAAACGTC
TTCATAATCGCTGGTTGTCTATCTCTCGTTCCACTAGTTGTAACACCGTTCATGATCAAG
TATGGAAAGCATCTGAGACGCCTGAGTGCAGATAAATACAACAAGAATAAGGGGGGTATT
TAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F29711g_CDS-001

Protein length: 581 aa.
Product: Conserved hypothetical protein

>YALI0F29711g_CDS-001 MSKQPRDPPKVNIPPLSKRSPGCPLRPTQSSHETDVLGEQIQGSLVKASKEDYPGYLKTG
PQSTRKESFFDPDFKVISIETGVVGSKDDISPGSEPPGTVLLETTLNNTTRHPTPSSDPN
DPLNWKPWRKALNFFLVLFFTVVAFSCNCVATAFWGQLNTELGFSFDELNNGFALGIGGL
GIGCPLFVPIAVKFGKRPVYLVATILVIVATFWQARMKYLHDYYAASFLEGLATSLCEAM
IQMTIADLYFVHQRGTMNGIFMIIIAISNFLSLVPAGYIATNINWNTCFWILGGLGSGFL
IVSVFCFEETKFERAEDDPRDIHELHPPQGKMKWQLRPYTITTGSWGDFFKTFYTPFVVL
ISFPIVLFVTLHYTFMLTWLAMCATTLANSFTQPPYEFSPEAIGNMNIAPFIGLLIGSFY
GGWLNDKSMLYLTKRNHGVYEPEMRLYMLIPMCLIMTAGVFMFGLSIATGTHWAVPMVGL
GVFAAGFGANGSITLTYLIDCYRDMISDAFIGIVVVRNIMSMVVTFCLSPWIDLNGLRNV
FIIAGCLSLVPLVVTPFMIKYGKHLRRLSADKYNKNKGGI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG