YALI0F29689g

Overview

Description some similarities with uniprot|P38316 Saccharomyces cerevisiae YBR217w APG12 component of the autophagic system
Locus type CDS
Locus tag YALI0F29689g

Location

Species Yarrowia lipolytica Positions 3726271..3727333
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1063 (nuc.)
Previous locus YALI0F29678g Next locus YALI0F29711g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F29689g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F29689gYALI0F29689g_mRNA-001YALI0F29689g_CDS-001

Nucleotide sequence

 

>YALI0F29689g
ATGATCGAAAGTGACTCAGACACCAGCGACGACGCTCCCCAGGAGTACGTCTCGGCGTCT
GCTAACATTCCTGCGCAATTTGAACTCGCCACAGCACATATGAAGGCTACTCCAGAGCCC
CAACCAACCCAACAGCCCGATGCAGAGGCGTTGCATGATGATGACCCCTTAACGACCACA
CAGGACCATCCAACGGGCCCCTCGGCTACTGCGTCCGACACAATCGACTCCACACCGCAA
CCAATGGCTCCGGCCACTCTCTCAGCTTCAGCTGTGCTCCCTTCACTTCCTTCAGATACA
GCTGCCCTCCTAGAGACGTTCTCACAACAGTTGCAGCAATCAAACGTCAAATGCCAGCTT
AAATTCCGACCAATTGGAGGAGCCACGCCTTCTCTAAAGCAATCTGTGTACAAAATCGCC
GAGACTCAGCAGTTTGGGGTTGTGGTCAAGTTTCTGAGAAAACAACTGAAGATCAAAAAC
TCCCAGAGCTCCCAGATATTCTGCTACATATCATCGTTTGCACCGGGACTAGATGAGACG
GTAGGCTCGTTATACAACAGATACGCTATCAGAGGAGAACTCACTATTTCATACTGCTTG
AACCAAGCCTTTGGCTGATTATTTATTCAATTGACGACTAATGTGAAAGACGACATTTGT
TGTGCTTGTATAGAGACGAGAATGCCATTGGCTTCGTACTTTAACGACAAGCAGATCTAT
GGTTGCGTTCCATAGAGGGGTGTAATCTCAAACAATGATGCGACTGACCTCCGACAACCC
GTATCAAACCGGCTGGATAGGAAGTGGCTTTTACCGCGCCCCCTATAAGTGATACTTTCT
AACCGTGGTTTGAGACAACGCACAGCTGATGATAACTTGCAAAATTCCTTGTCTTCCTAT
CTCGTGTCTCTATCTCGCATGACTCGGAGTTCGGTTTGTAATCTTTGGTCAGACCATACA
TACCACAAACACTGTTCGTTCATTTGTTGGATCCCTACCGCTGCTACAACGAGATGAACC
CATAACTCTCAAGATAAGTGAATAATATAACAATCCGAGATAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F29689g_CDS-001

Protein length: 206 aa.
Product: Conserved hypothetical protein

>YALI0F29689g_CDS-001 MIESDSDTSDDAPQEYVSASANIPAQFELATAHMKATPEPQPTQQPDAEALHDDDPLTTT
QDHPTGPSATASDTIDSTPQPMAPATLSASAVLPSLPSDTAALLETFSQQLQQSNVKCQL
KFRPIGGATPSLKQSVYKIAETQQFGVVVKFLRKQLKIKNSQSSQIFCYISSFAPGLDET
VGSLYNRYAIRGELTISYCLNQAFG*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG