YALI0F29513g

Overview

Description weakly similar to uniprot|P16664 Saccharomyces cerevisiae YDR137w RGP1 reduced growth phenotype protein
Locus type CDS
Locus tag YALI0F29513g

Location

Species Yarrowia lipolytica Positions 3710724..3713114
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 2391 (nuc.)
Previous locus YALI0F29491g Next locus YALI0F29524g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F29513g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F29513gYALI0F29513g_mRNA-001YALI0F29513g_CDS-001

Nucleotide sequence

 

>YALI0F29513g
ATGACTTCAGACTCAATCAGAGCCGAGGTTGTGTTCGAATCCCCGACAGTCTTCGGCGGC
GACGACGTACGGGCTGTTATAACATTCAGAAATGTGTCAAGGGTGACGAGTGTCGACAAT
ACTGACACCCGGAGTGATGTTCAAGCCGACACCCGAAACAGAAGCGACAGCTTTCACAAC
AACAACAACAACAGTCGCACGGAAGACCAGCCCAGAGCCTCCGTCGACGGCTGGCGAGAT
CGGTTCTTCGGCCTGCTGAGCACAGACTATGAGCCACTTCCAAGTAACCGGCTCTCACGA
GCTCGTTCAGTACGAAGAACGGCTCAACCGCCGGTCCGTTCGCCCCACGGTACCTCCGAG
ACCCTCATTATGGGCACGTGTCGAATTGAAGGCCATTTCGTTGTTGATCCTGAAGTCGTG
GATGTCGCCCGGTTGGAACACGTTCGAAACAGAGGAGCAGCAATGGGATTGGCTCATTTG
AGTGAAGTAGACGACTCCAAAGACGTGGACAATCACCAAGGAATTACCAAGATGATCTGG
GGACTACTAGGAGACGAGTCTAGTGGTACCCAAAGCAAATCTGCTCAATCGAGTGACTCC
GGAGAAGGCCTTCCCATTTACTCAAGTGCATCGTCTCTGCTGTTCCCTGCTCTAACACTC
AATCCAGGAGAAAGCAAAGTTTTCTATTACAAGTGCACATTACCCCGTGAGCTGCCTCCT
AGTTATCGTGGCAAGGCTGTCAGAATATACTACAGTTTGGTAGTTTCTACTCAACGAGGC
GAAAGCCGTCTGGTGGATCGCCCCGATATGTCGAATGAAGATAACTCACACGCAAAACCA
AGCCTCACGTCACGTTCTCATCGCCTCGTTGCACCCTTCCGAGTCTTCCAGTACGTTGAT
GACGACGGAGACTCGATCCCTCACCAGGTGGACAACCCAATTGGTGGAGAGCAGAGCGCC
GTAGCAGTGAAAGAGCTACCAGACTCTTCTCGTGAGACCATGAGCGACGTTTTCGGACTC
CATCATGTTGGCCCAAGCACAAAACCCGGCCCGAAGTCACGAGAGCAATTGTTAGATCAC
ATCAAGACACTCCGGACATCCCATGATCCATACGTATCGCATGACCAGTCCATGGAAGAC
GAGGAGGACGATGCAGGTACCTCTGCAGGTGCCCATATTAACCGTCTTGTCCAGTCCAAT
GGCCTCATCAGTAAGACTTTGGTGCCCAAAACCACCTTCCACATCTCTCGAAACTCCAAG
TACATTGCCACCTTGAGTCTCAGCAAGCCGCTATATCGAATCGGTGACTCTATGGTTCTC
AGTTTTGACTTCTCCGGCTCCCATACACCTTGCTATCACGTCACAGCTTCTCTGGAGACC
ACAGAGACTATTCACCGAAGTTATTTGCATGGATATGATTGGGACGACAGCTTGTTGAGT
GGCTGGGGTAACTCAAGTAACGGTAATCTCAGCTCTGGAAACGGCAGACGATCTTCAGTG
GGATCAGATGGTAGTGGACGTCGATTATCCGGATCTCGAGATCCCACCATGATCCCTCTG
CCGTCTACTCGCCGAATCTACGCTCAAGAGATGACGTTCATCTACGACTCACGTGACCGT
GTCACTTTCGACATGGTCGTTCCGGCAACCGCGGCATCTCAATTCGCCACCACCAAAATC
TGCATGGACTGGTCGTTGAAACTGACTTTTGTCACACATTTCGCCGATAAAAAGGATGCG
CAAATGATGGGTAGCTCGAAAAGCAAAACCCCCAACGCTCGCAGCTTAGTGCAGACCAAC
ATTCCCAGGCCTGCAGTCAGCGAGCCTGGTTCTCCGGTGATGGAAAGAAAGCGAAGCATC
GTGGGCGACTCCGCATTCCCCAACGCGAACGCTAACGGCAATGGTAAAAACGTTCTTACT
AACGGAGGAACACCCGGTAATATTCTCAACATTACAGACTCGGCTGTCATCGCGCCTGTA
GAGTATGACTCTAGAGGCACGACGTATGGACCCAAGGATACATTTTCCTGCGAACATTTC
TCCTGCAAAATCCCCCTCAACGTTTACTCCACTGACAAGGACATTTCGTCTGTGATTGGA
GTCAGTCGAGGCACGTCAGTGTATTCTGCCGGACTCTGGTAGACTATACACCTATATTTA
ATGATAATGGTAATGATCGGTGCTGTGGGTTTGCCATATTGAGAAGTCAGGACCGATAAA
CAAATATGCCTTGCCTAAGGTTGACCCCGCTCTGAACTTTCCATGAGCGAGTACAACTAT
ACCGATACAGGTAAGTACACCAACACCTATATTGTTGGGTTTCCAGCCCAATATAGCTGC
GGGAATGTCTTTCACTACGTGAGAACACACAATGAATGATACTTTGTGCAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F29513g_CDS-001

Protein length: 714 aa.
Product: Conserved hypothetical protein

>YALI0F29513g_CDS-001 MTSDSIRAEVVFESPTVFGGDDVRAVITFRNVSRVTSVDNTDTRSDVQADTRNRSDSFHN
NNNNSRTEDQPRASVDGWRDRFFGLLSTDYEPLPSNRLSRARSVRRTAQPPVRSPHGTSE
TLIMGTCRIEGHFVVDPEVVDVARLEHVRNRGAAMGLAHLSEVDDSKDVDNHQGITKMIW
GLLGDESSGTQSKSAQSSDSGEGLPIYSSASSLLFPALTLNPGESKVFYYKCTLPRELPP
SYRGKAVRIYYSLVVSTQRGESRLVDRPDMSNEDNSHAKPSLTSRSHRLVAPFRVFQYVD
DDGDSIPHQVDNPIGGEQSAVAVKELPDSSRETMSDVFGLHHVGPSTKPGPKSREQLLDH
IKTLRTSHDPYVSHDQSMEDEEDDAGTSAGAHINRLVQSNGLISKTLVPKTTFHISRNSK
YIATLSLSKPLYRIGDSMVLSFDFSGSHTPCYHVTASLETTETIHRSYLHGYDWDDSLLS
GWGNSSNGNLSSGNGRRSSVGSDGSGRRLSGSRDPTMIPLPSTRRIYAQEMTFIYDSRDR
VTFDMVVPATAASQFATTKICMDWSLKLTFVTHFADKKDAQMMGSSKSKTPNARSLVQTN
IPRPAVSEPGSPVMERKRSIVGDSAFPNANANGNGKNVLTNGGTPGNILNITDSAVIAPV
EYDSRGTTYGPKDTFSCEHFSCKIPLNVYSTDKDISSVIGVSRGTSVYSAGLW*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG