YALI0F29491g

Overview

Description similar to uniprot|P36114 Saccharomyces cerevisiae YKR018C (ohnolog of YJL082W) Protein of unknown function
Locus type CDS
Locus tag YALI0F29491g

Location

Species Yarrowia lipolytica Positions 3707519..3709770
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 2252 (nuc.)
Previous locus YALI0F29447r Next locus YALI0F29513g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F29491g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F29491gYALI0F29491g_mRNA-001YALI0F29491g_CDS-001

Nucleotide sequence

 

>YALI0F29491g
ATGCTCAAAGCTCTAGGTCTGGGAAAACGGGGCGGCGACATGCCCACCAAACCCCTCAAC
AATTCGACCGTCTCGCTTGCCATCATGGACGACGCTCTGCGGGTCGAAGAGGCATTTATT
GCCATGGACATGGTGATGGATGACCGAAGCAAGGAGGCTCTCAAGCTGATCCAGAAGGAT
GAGCCCGGATCGAGCGGCAAGTCTGTAGCCCGAGAACAGTCGGCCTTCTACAAGCTTGTT
ATCGGAGTCATCTACTTCATCGAGGCTACTCTGGGTTTCGAGCCTGAAAGCATCCGCCGT
GCCTCTGAAGCTTTAGCGGAAGCGGAGGCTGCAGCTGTGCGGCAAAAGCGAAACGTGTCC
AACAACGGAGCCCATGTTAGCTATTCCAAGTACCCTCCTGGTACCGAGTACCGAGTGGCA
TTCGCAGAGGCCGAACTCATGGGAGCCATCACGCTGTTTCTGTCAGAGTCTTATCTGGAG
TCCGTCAAGGCCCTCTACAAACTGCGAAAGGCATACCAGACGCTCGATGAGATCAGCAAG
AGCATCAGAGAGTCCAAGAAGCCCGCCAAGAGCTCGGATCACAAGTCTACTCTCGATTCG
CTGAGCCTGGCTGTTTCCGATGATCAGGAAATGGCTTCTTTGGTGGAAAAGTTCCAAAAG
ACCCGGCTCAACCGACTCAACGAGAGCAATAACGCCACTCCTGTTGCCTCGTCTGCTGCC
TCCATGAACACCACTACCTCTTCTGCTACGGCTCTCCACCAGGGATCAGAAACCATTGAG
GAGTTCATTGAGTCTGGCGTCGATCTGTGTTTCGGTATTCTGCAGCTCGTCATCAGTATC
ATTCCCCCCACACTGGGCAAGATTCTGTCCGTTGTTGGATTCAGAGGCTCCCGAGATGGT
GGTCTTTCTCTGCTTTGGGAGGCCACGAACTATAGAAACATCCACGGAGCTTTGGCCCTG
CTTGTTCTGCTGCAATTCTACGACGGTCCAACCCAATTCTCCGACCTCATCCTTCCTGGA
ACTGAGGAAGATCTCATTCAGCAGGGCAAGTACGACATCAACACAGCCGACGATACCGAA
ATCACCCTCACAGCCACCATAACCGGCGGATCCGGACACTCCAAGAAGGTGCATACTCTG
CCCAAGAATCCCCGACGTCGAATGCACAAGCTGTTGCTTGCCGCCCGAGGCTACTACCCT
CATTCGGCTCTGTGGATGCTTCAACAGGGCCGAATGGAGGCCTCTCAATGCCATCTGGAA
AAGGCCGTGGATATCATGGACGCTGACATCGGCCCCATTGAGATGAAGCAGGTCGAGGCT
CTCATGTTGTTTGACAAGACCATGTTCATGCTCTTCCTCAACCGATACGAGCAGTCTGCC
ACCAACTTCATCCGTCTGATTGATATCAACGCCTGGTCTCATGCCTGGTACACATACGTG
GCTGCCACCTGTTCCATTGAGATCTACAGAGAAAACCTGCGTGCTGGAAACGCCGAGGCT
GCTAAGAAAGCAAAGGACACTGCCACCCGGCTGCTGACAGAGGCTCCCGGTCTGATTGGA
AAGAAGAAGCTCATGGCCAAGACTATGCCCATGGACGTTTTCCTGTCGCGAAAGATTTCC
CAGATGCAGCAGCTTTCAAAGCAACACAACATTGACCTTGTCGATGCCGCAGGCGTGTCT
CCTGTCCAGGAAGTTGTCTATTTCTGGAACGGATACGGAAAGATGCCCGAGTACGCTCTG
GAGAAGGTTTTTTCCGAGGTATTGGCTTACTCTGCTGCTCCTCTGGCTCCTAGCCATATT
CCCGAGCAGGATAACGAGAAGACTGTCAGACACTTGTTGCAGGCTGTGGCTCTGAGAAAC
ATGGGTAAGGTAGAGGAGGGGTACAAGATACTCAATGACAACGTCATTTCGCAGATTATC
ACTGAGAGCAACAACAAATACCACTACAACAAGACCGTGACTCACAAAGACCCCTGGATG
CCTCCTTCGGCGCTGTATGAGCGTGCCATGTTTGAGTGGGTCATGCATGGACCCAAGGGC
ACAGAGACTGTCCGAGAGTGGCTACATCTGGCCGAGAAGTGGTCTGATGACTACGAGTTG
AGTACGCGAGTTGGAATGAAGATCAAGTCTGCCTTTGAGCGTCTTGATGGAGGTGCTCTT
GCTTAGATATTTAGTCGGAGACACTGACACTGAGCACAAGTAAACGTATATATATAAAAA
ATGTATTAAGCTAATAGAGTGATGTTTGTGAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F29491g_CDS-001

Protein length: 722 aa.
Product: Conserved hypothetical protein

>YALI0F29491g_CDS-001 MLKALGLGKRGGDMPTKPLNNSTVSLAIMDDALRVEEAFIAMDMVMDDRSKEALKLIQKD
EPGSSGKSVAREQSAFYKLVIGVIYFIEATLGFEPESIRRASEALAEAEAAAVRQKRNVS
NNGAHVSYSKYPPGTEYRVAFAEAELMGAITLFLSESYLESVKALYKLRKAYQTLDEISK
SIRESKKPAKSSDHKSTLDSLSLAVSDDQEMASLVEKFQKTRLNRLNESNNATPVASSAA
SMNTTTSSATALHQGSETIEEFIESGVDLCFGILQLVISIIPPTLGKILSVVGFRGSRDG
GLSLLWEATNYRNIHGALALLVLLQFYDGPTQFSDLILPGTEEDLIQQGKYDINTADDTE
ITLTATITGGSGHSKKVHTLPKNPRRRMHKLLLAARGYYPHSALWMLQQGRMEASQCHLE
KAVDIMDADIGPIEMKQVEALMLFDKTMFMLFLNRYEQSATNFIRLIDINAWSHAWYTYV
AATCSIEIYRENLRAGNAEAAKKAKDTATRLLTEAPGLIGKKKLMAKTMPMDVFLSRKIS
QMQQLSKQHNIDLVDAAGVSPVQEVVYFWNGYGKMPEYALEKVFSEVLAYSAAPLAPSHI
PEQDNEKTVRHLLQAVALRNMGKVEEGYKILNDNVISQIITESNNKYHYNKTVTHKDPWM
PPSALYERAMFEWVMHGPKGTETVREWLHLAEKWSDDYELSTRVGMKIKSAFERLDGGAL
A*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG