YALI0F28523g

Overview

Description weakly similar to uniprot|P38838 Saccharomyces cerevisiae YHR134w WSS1 unknown function
Locus type CDS
Locus tag YALI0F28523g

Location

Species Yarrowia lipolytica Positions 3625837..3626713
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 877 (nuc.)
Previous locus YALI0F28501g Next locus YALI0F28545g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F28523g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F28523gYALI0F28523g_mRNA-001YALI0F28523g_CDS-001

Nucleotide sequence

 

>YALI0F28523g
ATGGAGTTCATCTCCAACATCACAGTACTGAAAAAGCGGCCAGGATCCGAGGCTGCTCTG
GAAATGATAACCAGGGCCGCACGGTTCGTGCAACCCATCATGAAAAACCACGGGTTCAAA
GTAGGTACTCTGTGTGAGATGTTCCCCAAACACGCCAACCTATTGGGTCTCAACGTGAAC
CATGGCCAGAAGGTATGTTTGAGATTGAGACAGCATTACGACGACAAGATGTTCCTACCG
TTTGAGAGTATCATGGGCACCCTGCTCCATGAACTGTGCCATAACAAGTATGGTCCTCAC
AATGCCCAGTTTTACGCGTACCTCAAGGAGCTTGAGGACGACTATTATGCATTAAAGGCA
CGAGGTTTCAACCCAGATACCCCTTACGGATTCCTGGGACCTGGCAAGACACTTGGTAGT
GGAGGTGGACGTAAATTGAACGGTCCAGCTAGTGGTATTGCAGGCATTCCAGGTTTGGGT
GCTGGTCCTGGCGGAAGAGCTCTACCAAAGACAAATGTCACACTTTCTCCTTCAAAGGTA
GTAAAGCCAAAGACGGGTCGACAAAAGCGATTCACAGGAACAGGCAATGTGTTAGGTAGC
TCTACCCCCTCTCCACCACCTGTTCCTGGTAGACGAAGGCCGAGGGCTCCTACGCGTGAG
CAGATTCTCGCTGCTGTGGAGAAGCGAATAGCCGATACCAAATGGTGCGCCAGTGAAAAC
GTGGAGATATCCAAGGAGGTCGACGAGAACGACGATGACGTTGTGTTTCTCGGGGCTAAA
AACGCAAGTGAGATTGAGGTCATCGACCTCACTTGATGCATTAACTTATAGATATGACGT
ACAAGTAGAAGTGTCACTAATTAATTGACAGTATTTA

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0F28523g_CDS-001

Protein length: 272 aa.
Product: Conserved hypothetical protein

>YALI0F28523g_CDS-001 MEFISNITVLKKRPGSEAALEMITRAARFVQPIMKNHGFKVGTLCEMFPKHANLLGLNVN
HGQKVCLRLRQHYDDKMFLPFESIMGTLLHELCHNKYGPHNAQFYAYLKELEDDYYALKA
RGFNPDTPYGFLGPGKTLGSGGGRKLNGPASGIAGIPGLGAGPGGRALPKTNVTLSPSKV
VKPKTGRQKRFTGTGNVLGSSTPSPPPVPGRRRPRAPTREQILAAVEKRIADTKWCASEN
VEISKEVDENDDDVVFLGAKNASEIEVIDLT*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG