YALI0F28325g

Overview

Description some similarities with uniprot|A7S7W4 Nematostella vectensis predicted protein
Locus type CDS
Locus tag YALI0F28325g

Location

Species Yarrowia lipolytica Positions 3603293..3604150
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 858 (nuc.)
Previous locus YALI0F28303g Next locus YALI0F28347g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F28325g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F28325gYALI0F28325g_mRNA-001YALI0F28325g_CDS-001

Nucleotide sequence

 

>YALI0F28325g
ATGGTTGCTATCAAGTACTCTCTCGCTGCTTCTATCCTCGCCGCCTCCGCCATGGCCGCC
CCCGCTCTCGAGGAGCGAGGAGGCTCCGACCACGGATCTTGGGGTGGAAAGGGCGAAGTC
TCCAAGGGTGGATCTTGGGGTGGAAAGGGCGAAGTCTCCAAGGGTGGATCTTGGGGTGGA
AAGGGCGAAGTCTCCAAGGGTGGATCTTGGGGTGGAAAGGGCGAAGTCTCCAAGGGTGGA
TCTTGGGGTGGAAAGGGCGAAGTCTCCAAGGGTGGATCTTGGGGTGGATCCAAGGAGGAA
ACCAACTCTTGGGGTGGCCAGGGCAGTGTTGCTCCCGTCGGCCCAATCATCAAGACCATT
CAGGATTGCAGTGTCGGCATTTCCGGTGCTGTCTCCCTTGTCGCCTCTTTGACACTTCAC
GGTGACATTTCTTCCACCACCACTGCCCTTGCTATCTGTTCCAAGGCTGTGGAGGGCCTC
TCTCAATCTGTGCCTGCCCTCATTGCCGGGATCCAGGGCTCCATCATCTTCCAGCAGGGA
GGTGCCCTTGCGCAGCTCTGTGCTCCTGGCCTGTCCACCATCGTGAACTTGACCATCCAG
GTCGTTTCTTCCCTGATTGGAGTTATTGGCAAGCTCATCTCCAAGTCTTGTTCCGACGAG
CAGATCACGCAGATTGCCACCCTCCTGCACACCTGCAAGGGTCTCATTGTCGACCTCAAC
GGTTGCCTTGGTGGAATTGTCTCAGGTGGTATCGACTTTGGCCATGGCAAGCTCACGCAG
GACCTGCTCCCCAAGATTGACGGCGCAGTCAACTCTTGCCAGTCCTGCCAGACCAAGAAG
GTCTGCAACGGCTGGTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F28325g_CDS-001

Protein length: 286 aa.
Product: Conserved hypothetical protein

>YALI0F28325g_CDS-001 MVAIKYSLAASILAASAMAAPALEERGGSDHGSWGGKGEVSKGGSWGGKGEVSKGGSWGG
KGEVSKGGSWGGKGEVSKGGSWGGKGEVSKGGSWGGSKEETNSWGGQGSVAPVGPIIKTI
QDCSVGISGAVSLVASLTLHGDISSTTTALAICSKAVEGLSQSVPALIAGIQGSIIFQQG
GALAQLCAPGLSTIVNLTIQVVSSLIGVIGKLISKSCSDEQITQIATLLHTCKGLIVDLN
GCLGGIVSGGIDFGHGKLTQDLLPKIDGAVNSCQSCQTKKVCNGW*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG