YALI0F28303g

Overview

Description weakly similar to uniprot|Q12500 Saccharomyces cerevisiae YLR114c unknown function
Locus type CDS
Locus tag YALI0F28303g

Location

Species Yarrowia lipolytica Positions 3599089..3602733
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 3645 (nuc.)
Previous locus YALI0F28281g Next locus YALI0F28325g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F28303g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F28303gYALI0F28303g_mRNA-001YALI0F28303g_CDS-001

Nucleotide sequence

 

>YALI0F28303g
ATGGCCAAAAAGAAGTTGAGAGCCGGAGAGGTACGTCGCCCGGCCGGAGGAGCCACCACA
GCAGGAGCCGCAGCTTCGAACGGATCAGCCAACGGAGCTACCGCGTCCGGTACCACCTCA
CGATCTGTGTCCGGAGAGAGTAGCGGAGCCGCTGGAGCCACTCCTCATGCTCCTCCGAGA
GCCCGCAACCGCCCACGAGCCGGGCAGATCAACACCTCTGTTAAAATGACCTCTAGCACA
TCCAATTCGCCCACCACAAGCGTTCCGTCTTCTCCGAAGACCCCCAGATCACCTAGAACG
TCCGTTCCTTCTTCTCCACAGGTGGCCCAGTCTCCCAAAGTGCCCCAGTCTCCTCGAATC
GTTTCTTCTTCTCGACCGGGATCCGCTGGTTCGCCAGTCTCTGTCAAAACCAGTTCAAAA
GCTGTAAAAACAGAGGCAACTAAACAGCCAGCTACTCGAAAAGTGGAGGCCGTGGTTATC
GATTCGTCTGACTCCGAAGACGAGTTTCACGACACAGAGGCTGTGGTAATCGATTCCGAC
GACAATGACGACTACGACGCTGTCATCGAGACCGTCAGCCAGCCCGTGCTGTCTAAGGCC
AAGGTGGTGCGAAAGAAGGAGCCCGAGGTGGCCACTACGACCCAGACAGCCCAGAAGGCC
GTATCCGGAATTCCCCAGATCAAAATCTACTCTCCTCACAACACTCAGTCGGAATTCAAG
CCCAGTGAAGACGAGGACGACGAGGACGAAGAGATCTCTATGGGGGACAACAAAATCGAG
TTTGGTAAGGAGCTCACCAAGGATATCAGCAACAAGACGGACGCTGCTGCTGCTTCAGTT
GGCGCGCCAATCCCCTCGCCAGTGGCTTTCACTCCTCCTCCTCCTGTGAACTTCACTCCC
CCTCCCGCAAGCCCTCCTGTGGTGGTTGATCTGGACGACGACGACGGAGAAGTGAGATAC
AAGGATCGGTTCAAAAAGAGAGCCGCCGATACAAAGCCCGCAGCTGGTTCTACACCAAAG
CCCGAGGAGGAGGTCATTGATCTTGATGAAGAGTCTTCCCAATCCCCCACAATCACTCCA
GGTGCATTCCCTACCCCTGGGGCCTTCCCCTCATCTGCACCAAAGACAAAGAAAGAGCCT
GTCAAAGAGGTCAAGAAACCTGTCCAGGAGAAAAAGATTGAGGCAAACGAGCCTGCCAGG
GACGAAGCCGAGTCAAAGAAGACCAAGTCAAAGAAGGACACCTTGCCAGAGACTTCTGCA
ATCACAGAAAGCGTTGCCGCAGGTGTGGCCGCTTCTGTGAGTGCTACAGCTGCTGCTTCC
GAAATGGCTTCCGATCATACTCCTCTGCAAGAAACTCCTTCTACACCTACCAAGGCTGGT
GACGCTAATTCAACTGCTGCCATCGACATTGCATCTGGCTCTCCTGTGACGTCACCCAAT
GGTTCGCCTCTCAAGGGTATTCTCAAACAGCCCAAGCATGCCAAGAAGCCGTCCATTCGA
GCCACTCACACTACCATCACGGAACCAATTCCCGATGACTCGCTTCTCTTCTCCGTCTGC
ATTGTGGGATTTCACCATTCTCTGGGACCCCAGATCGAGGAATGGTTTGGCCCCGAGGAC
TACTCTCATCTGTGGCCAAACCTACCTTTCCAGGCTCTCAGTGATGGATCCCATTCTCGG
GAAGAGGACTTTTCATACTTCACTCTTCTGTTTGATGAGAACAACAAGAGCGCTCCTGGA
GCTGGTGGGTACTCCGATGGACGTCCTTTCAATACCCAGACCGTTACAACGCTGTTTGGT
ATCGCCTGTAACCGTCAGGTTGGCGTGACCGATGCTCTGAAGCAGGATTTGGCTGTGACT
CGAAGTACTGTTCAGAAGTGTGTTGTGGTTATATGCCGAAAGCCCATCTGGGGCCCCATG
AAGGACAAGCTGGCTGTGGTGACACGTGCATTCTTTATGCAGCCCACTTTTGACGATAAG
TCCATCATTCGAAGCTTGTTTGACTCGCTGGCACACACATTAACGCTGTCCAAGTTCAAC
TCAGACACTTCTTCTGACGTGTCCATCGGCATGTCGCTCTGTGAGCTGGTTTCACGTCTC
AAGCAGAAGCTGGTGGTGGTATTTAAGGCCCTGTTGCTCGAGAAACGAGTGCTTTTCTAC
GCTTCTTCAACTGAGCTGCTCTGTACTTCACAGTTCTCTCTGGTTTCCCTTATTCCTAAT
CTCATCAACAACCTGCAAGATTGCGGATCTCCCTTGCTGCATTCATACGAGCTCGGACTC
ACTCGTGCAACCTCACTTAAAACCTCTGATCGGCAGTCTCTGCTCAACTTTATGGGACTG
CCTCTGATGGTCTTTGGAGAGGGTGGTATGTTCTCTCCCTACATTCCTCTGCAGCAGCTT
GGCGACCTCGCTCTGGCTAGATACTACCTGGTTGGAAGCACAAACTCACTCCTGTTGCAA
CAGAAGAAACAGCATGCCGATGTGCTTGTAAATATGGACGACAACACCGTCGAGATTCTC
AACTCGTCGTTGAAGTCGCCGCTATCCTTGTCGTCGTACGATAAGAAGTGGATCGAACGA
GTCGTGCAGGCTGTCGACACTTCGTCTGGAAACTCTGCAGCCACCACATTCCATGGCAAT
GAGGACTATGTCAGACTCCAGTTTGAAGACTACCTCATGGGTCTTCTTTCTGCCGTCAAG
TACGACAATTTCCTTTCTTCCCATGGCTCGGCTCCTCCACCAGAGATGCTTCTTAAGGAA
GTCCATGGCAACCCTGTCAAGCACTTTTCTCTGGACTGGGTCAACTGCTGGCGAAAGACC
CTCAATTACGAGTTGTTCAATAACTTCACCGATGGGGAGCTCTTTGACATTGTCGAGCCT
AGACACATGGCCGACGCTGGCGTCACTGAGAAGCAGAAGTCGCCTTTCAGTGAGGTTGGC
AAAGCCTGGGCTGGCTTGTTCAGTAAGAACGGTTCCAACACTGCTATTGACAAGACAAGT
GGCAGCAGTTCCGGTGACAAGGAGAAGTCTGTCTCTCCTACAACTTCCTCAGTGTCTCCT
TCGGTGGCTACTACTGTCGCTGCTGGCCACGGCACTTCTGCCAACGAGACTGCATCTCTG
CCTTCAGACACTTCTGTGAAGACACATCGATCATCTGACTCCACTTGGTCCATGCAACAG
AAGTCCACATCATGGTTCAGCCGATTCTCAGCTGCCCCCAAGGACGACACTGAGTCTAGC
GAGCCTCTCACACCCCCTCCTCCTGTTTCTGAACGACCCAAGGCACATTCCGAGACCTCT
GTCAGTGGTTGGGGCAAGTGGGCCGCCAGCAAGAAGATGACCTTGTTTGGCGATGCGAAT
GGCGATGCCGAGAAGGAGAAGCCGCAAGACAAGACAGAAGACAAGGCAGAAGACAAGAAG
GAGAATGAGAAAGATGGGGACACAAAAGAGACTTCAGAGGACAAATCTGACGGTGCTGAG
ACGGTCAAGGCTGCTGAGCCTGAGGAAATAGAGATGCATTTTGAGGATTCTCCCATCAAG
AAAAAGGAGAACATTTCTGCAGCGACGTCTCCCACAAAATCAGTCAAGGAACGGGCTGCG
ATGTTCCAATAGATATAAGATATTAAAGACCAGTTGTTTTTGTAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F28303g_CDS-001

Protein length: 1204 aa.
Product: Conserved hypothetical protein

>YALI0F28303g_CDS-001 MAKKKLRAGEVRRPAGGATTAGAAASNGSANGATASGTTSRSVSGESSGAAGATPHAPPR
ARNRPRAGQINTSVKMTSSTSNSPTTSVPSSPKTPRSPRTSVPSSPQVAQSPKVPQSPRI
VSSSRPGSAGSPVSVKTSSKAVKTEATKQPATRKVEAVVIDSSDSEDEFHDTEAVVIDSD
DNDDYDAVIETVSQPVLSKAKVVRKKEPEVATTTQTAQKAVSGIPQIKIYSPHNTQSEFK
PSEDEDDEDEEISMGDNKIEFGKELTKDISNKTDAAAASVGAPIPSPVAFTPPPPVNFTP
PPASPPVVVDLDDDDGEVRYKDRFKKRAADTKPAAGSTPKPEEEVIDLDEESSQSPTITP
GAFPTPGAFPSSAPKTKKEPVKEVKKPVQEKKIEANEPARDEAESKKTKSKKDTLPETSA
ITESVAAGVAASVSATAAASEMASDHTPLQETPSTPTKAGDANSTAAIDIASGSPVTSPN
GSPLKGILKQPKHAKKPSIRATHTTITEPIPDDSLLFSVCIVGFHHSLGPQIEEWFGPED
YSHLWPNLPFQALSDGSHSREEDFSYFTLLFDENNKSAPGAGGYSDGRPFNTQTVTTLFG
IACNRQVGVTDALKQDLAVTRSTVQKCVVVICRKPIWGPMKDKLAVVTRAFFMQPTFDDK
SIIRSLFDSLAHTLTLSKFNSDTSSDVSIGMSLCELVSRLKQKLVVVFKALLLEKRVLFY
ASSTELLCTSQFSLVSLIPNLINNLQDCGSPLLHSYELGLTRATSLKTSDRQSLLNFMGL
PLMVFGEGGMFSPYIPLQQLGDLALARYYLVGSTNSLLLQQKKQHADVLVNMDDNTVEIL
NSSLKSPLSLSSYDKKWIERVVQAVDTSSGNSAATTFHGNEDYVRLQFEDYLMGLLSAVK
YDNFLSSHGSAPPPEMLLKEVHGNPVKHFSLDWVNCWRKTLNYELFNNFTDGELFDIVEP
RHMADAGVTEKQKSPFSEVGKAWAGLFSKNGSNTAIDKTSGSSSGDKEKSVSPTTSSVSP
SVATTVAAGHGTSANETASLPSDTSVKTHRSSDSTWSMQQKSTSWFSRFSAAPKDDTESS
EPLTPPPPVSERPKAHSETSVSGWGKWAASKKMTLFGDANGDAEKEKPQDKTEDKAEDKK
ENEKDGDTKETSEDKSDGAETVKAAEPEEIEMHFEDSPIKKKENISAATSPTKSVKERAA
MFQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG