YALI0F27731g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0F27731g

Location

Species Yarrowia lipolytica Positions 3527113..3528222
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1110 (nuc.)
Previous locus YALI0F27709g Next locus YALI0F27753g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F27731g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F27731gYALI0F27731g_mRNA-001YALI0F27731g_CDS-001

Nucleotide sequence

 

>YALI0F27731g
ATGACACACACCATCCAAAACACACGAAAAATGAAATCTTTCGACCTGTCGCGAATCAGC
AGATCGCTATCCTTCAACAACAAGCAAGGAACGTACCCAGAAACGCCAGAAACCGACCCT
GAGTACTTCCACACCTCCATCAAACCGACCCAGAGTGAAGCTAATACGATACATACGACC
TGTGCGAGACCCCGAACCTTAATTGCCGCATCATGCAATAAGATCCATAATGGGAATACA
AGTGCGGTGCCCAAGATCACACAAAGCGCACCAGTGTCACCCCAGATGTCCAGCATCAAT
GCCCAACCATGGCCAGAGCTGGACCTGGAGATCCCGGCGCTGGTGCCTGACAGCTCGTCA
CGTGATACCTCGCTGTCACGCATCAAATCCCATGACCACCTGGAGGTGCCCCTGGGTCAC
CATCATGTGAGCACCATAGATGAGGACCGGGAGAGCATGTTGTCCTTGACCCCCACCACA
CATCAGCAATACCATCCCCATCAATACCCCATGCCCGTAAGGGGGGATCTGCGGTGCCCC
AGCTTTGTTTCTCGTGACTCGATGGACTCGGCACGTGACTACCCCTGTTTCCACGAGCCT
GTATTCGATGTTGAGTTTGACAACTCTTCTCCTCTCGAGGGTATTAACCCCCTTAATCGG
GTGGCTCAGGGCTCTCTTGTGGACGATCAGCAGTCCGTCAACTTGGGTCCTATCAAGCCG
CGTCCTGAAATCAAGCCCTTGGTTCATGCTTCTACCTTTACCGAGGATCTTGTTCGGTTC
CCTAGTGAGCTGGTTAAGCTGCCAAACAAGATCAACAAGAAAGTCAAGCATCGAAGCAGC
AAGCTGATCAAGCGGCCTCAGGTCAATATCGATATCGAGGAGCTCGACTCTGAATTGGAA
CGGTTTGAGACAGCCACAAATACCGCCTGTGTGGAGAACGTAGAGAGCCACAAGGTACAG
AAGAAAAACAGCAAGAAGGTGGACAAGAAAAACGGCTTCAACCGGATGATGATGAAGGTC
ATTCGACCGTTCAAGTCGTCATAAGTTGCGACACAAGAACAAATCTCCGACACTAACTGT
ATATATTAATGCACGCATTTTATTTAATGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F27731g_CDS-001

Protein length: 348 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0F27731g_CDS-001 MTHTIQNTRKMKSFDLSRISRSLSFNNKQGTYPETPETDPEYFHTSIKPTQSEANTIHTT
CARPRTLIAASCNKIHNGNTSAVPKITQSAPVSPQMSSINAQPWPELDLEIPALVPDSSS
RDTSLSRIKSHDHLEVPLGHHHVSTIDEDRESMLSLTPTTHQQYHPHQYPMPVRGDLRCP
SFVSRDSMDSARDYPCFHEPVFDVEFDNSSPLEGINPLNRVAQGSLVDDQQSVNLGPIKP
RPEIKPLVHASTFTEDLVRFPSELVKLPNKINKKVKHRSSKLIKRPQVNIDIEELDSELE
RFETATNTACVENVESHKVQKKNSKKVDKKNGFNRMMMKVIRPFKSS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG