YALI0F27709g

Overview

Description weakly similar to uniprot|P38731 Saccharomyces cerevisiae YHL040c ARN1 ferrichrome-type siderophore transporter
Locus type CDS
Locus tag YALI0F27709g

Location

Species Yarrowia lipolytica Positions 3520873..3522744
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1872 (nuc.)
Previous locus YALI0F27687g Next locus YALI0F27731g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F27709g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F27709gYALI0F27709g_mRNA-001YALI0F27709g_CDS-001

Nucleotide sequence

 

>YALI0F27709g
ATGGAAAAGTGCAAACAGGTCTTCCACGAAGTCTTTCTGTCTACAGCCCCAGTCAAGCAC
TATCCCAAGAAGGAGTGCAATACCAATGCCAAGGAACGAGGCTGGACCCAGAAGAAGATC
ATCATTGGATGGATCTTCGTCTACCTGTATTCCTCATCCAAAACCATTGCTCAACATCTC
TATCCTTCTCTGGCCCCTTTCGCTACCTCTCATTTCAGTGGTTTGGCTCTTCTGTCGTCT
CAGTCTGTCGTGGAGTCAGCTGTTTTCGTTGTCACCCGTCCAGCCGCTGCCAAGATTGCT
GACCATCTAGGTCGACTAGAGGGATGGTGTGTTGTCATTATCGCCCACGCTCTGGGCTCC
ATTCTGTATGCTGCTGCTCCTAACATTGGATGCTACTTTGCAGGAACTGTCTTCTGGGAA
ATCGGAATCGTCAGTGGACATCTCATGATGGAACTATACGCTAGTGACACTTCCACCACC
GACACCCGAGTTCTGTGGTCCAGTTTCATCCAGACCCCAAGTATCTGGGCACCTTGGATT
TCCGCTCCTGTCTTGGCGGGCTTCCTCAAAGTGACCACCTGGAGATGGGGCTATGGAGCA
TTTGCTATCATTCTACCTGTCTGCTCCATCGGTACAGTCATCATGATGGCATACATGCGA
ATCAGATATGAGCGAAAGGCTGGCGGTCTGGGTGACTTCTATTCTCCTGGAGGACCCTTG
CGATTCATCAAGAGTTTTGATGTTGTCGGACTCGTCACTCTGTGTGCAGGTCTCATTCTG
TTCTTCCTCCCCATTACTCTTGCTGCTGGTTCTGAAAGATGGAAGCTTCATTCCTACATT
GCCATGCTCACTATCGGTTCCTTCCTAATTGTCTTTTTCACCGTCTGGGAATACTTCCCT
AAGGCCCCTTTCATGCCCTGGAGACTATTCAAGAGTCGAGTTATGTGCTGTTCCGCTGCC
CTGGTTTTCCTCATGTCGCTCGCAAACAAGCTCTACGTCCCCTACTTCATCACCTGGCTT
ATGGTTGTCAAGGGTCAGAGTCCTAAGGCTGCTACCAACGTTTCAAGTGTGCTGGTTGTC
TCCTCTAACGTCTTTGGAATGTTCTTTGCTGCTCCTTACATGTGGTGGAGTGGTCGACCT
AAGCGAGTTCTTGTGTTTGGATGCTGTTTCCATCTCATCGGAATTGGCCTTACATACCAC
TACCGACAGCCTTCGTCTGGTCTAGCAATCATGATTGTTGCTCAGTGCTTTGAGGGTGTG
GGACGAGGCTGCATTTACATTCCTGCTGCTACCATGGCCCAGGCCATGTTTGACAAACAT
AAGGTCGCTGCTGTGACTGCTCTATACTTTTCTTCCGGAGGTATCGGACAGGTTATTGGA
GACGCCATCTGTGGCGCCATATACCGGGAGCTGTACCCTCGATACATCCACAAGTATGCC
CCCGACATTCCCCACAAGGATCTGAACCTCATCATCAACAAGATCAAGAAGGCCACCAAG
TTCCCCATGGGTTCGCTGGTCCGAACCGAGATTAACCATGCCTTCAACGAGACCATGAGA
CACATGCTGGTTGGACCCTTTGCCTGTGTGGGAGCCATGGTCATTGTCAGTCTCATGTAT
CCTTCCATTGACCTCAAGAGCGCTGCCAGAGATGGCGAAGTGGAAGGAGAGGACCAAATG
GATGAGGACGATCCCATGGCCATTCATGGCGTTCCCGAGGGAAGCGGAAGTGAAAGTGAA
CACGATCAAGAGGAGCAGTTTGGCGAGAAGGACTCCAGAGAAGACACCGGCTCTGAGTCT
GAGCATGCTAACGAGAAGATGTCTGCTGAACGAGCTGCTGCTGGTTACATTAACGATAAC
GTGATGGTTTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F27709g_CDS-001

Protein length: 624 aa.
Product: Conserved hypothetical protein

>YALI0F27709g_CDS-001 MEKCKQVFHEVFLSTAPVKHYPKKECNTNAKERGWTQKKIIIGWIFVYLYSSSKTIAQHL
YPSLAPFATSHFSGLALLSSQSVVESAVFVVTRPAAAKIADHLGRLEGWCVVIIAHALGS
ILYAAAPNIGCYFAGTVFWEIGIVSGHLMMELYASDTSTTDTRVLWSSFIQTPSIWAPWI
SAPVLAGFLKVTTWRWGYGAFAIILPVCSIGTVIMMAYMRIRYERKAGGLGDFYSPGGPL
RFIKSFDVVGLVTLCAGLILFFLPITLAAGSERWKLHSYIAMLTIGSFLIVFFTVWEYFP
KAPFMPWRLFKSRVMCCSAALVFLMSLANKLYVPYFITWLMVVKGQSPKAATNVSSVLVV
SSNVFGMFFAAPYMWWSGRPKRVLVFGCCFHLIGIGLTYHYRQPSSGLAIMIVAQCFEGV
GRGCIYIPAATMAQAMFDKHKVAAVTALYFSSGGIGQVIGDAICGAIYRELYPRYIHKYA
PDIPHKDLNLIINKIKKATKFPMGSLVRTEINHAFNETMRHMLVGPFACVGAMVIVSLMY
PSIDLKSAARDGEVEGEDQMDEDDPMAIHGVPEGSGSESEHDQEEQFGEKDSREDTGSES
EHANEKMSAERAAAGYINDNVMV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG