YALI0F27643g - BEM1

Overview

Description uniprot|Q8J0E4 Yarrowia lipolytica YALI0F27643g BEM1 Bud emergence mediator
Locus type CDS
Gene name BEM1
Locus tag YALI0F27643g

Location

Species Yarrowia lipolytica Positions 3504821..3507656
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 2836 (nuc.)
Previous locus YALI0F27621g Next locus YALI0F27654g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F27643g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F27643gYALI0F27643g_mRNA-001YALI0F27643g_CDS-001

Nucleotide sequence

 

>YALI0F27643g
ATGATCAAGGTGAGTATTAACGGCTGTTTGGAGGCCGTATGCGGACTGCTGAGGGTGTGT
GATGGGTCCACGAAGCTCGCTGGACACCCAGCATGTCTCCAGATGTCGTTACACCCCTAG
GAAGGTGCTGTGGCGTGAGTGGAGACCCCATGCTGTCACAGAGGAAACATGAACGGAAAT
GGAGAAAGAGCAATGGTGGACATGGGAACAGTCAGAACTGGAGATTACGTTGGTATTAAA
TGTTCTGCATCGCTGTTTTCATCGTTTCTGTGTGGCTTTGGGGTAGCTTTGGGGCTGTCA
CAGTGTGATTGCCATGTCCATGATAAGCAACTAAACCGGGCGCTAGTCAGGGGCATGGAC
CGTGTATTCAGCGGACCCATATTCAGTGTTGACTACGCAATCATTGACCAGATAGAAGCT
CCAAGCTCGTTTTGTTTCTGTTTCCAGGCCTGGGGCATACGAGCAGAAACACCCTTCCAA
CCGGAGCTACCCCATCGATATACCCATCACTTCACCAATCCCTCCTAAAGGCTGTTTTAT
GACTCTTTACATCCTTGTCACCACAGACTTGGTGTTGTTATGGGCTTGTTTTTTACGTCA
TGACACAAGAAGCCGGCTGCTGTTAGCTCCTGACGCACGGCCCCTCGGTTCCGTATACTA
ACTCAGGGAATCCGCCGCTCTCTCAAAGGCGAGAAGACCACGTCGTCTGGCTCGGCCAAC
TCGCTGGTCAGCGACAAAAACCCGCTCCACACGAACCCCCCGAAAATGGTGATTCGAGCA
CTTTACGACTACGAGCCACAAGGACCCGGCGAGCTCTCATTTTGCAAGGGCGACTTTTTC
CACGTGATTTCCAACGAACAGGACTCGGAGTGGTTTGAGGCTTTCAACCCGCTGCGCAAC
GTGCGAGGCATGGTGCCCGTGCCTTACTTTGAGGTTCTCGGCAAGAAGGAGGGTATCACC
TCGCCCGACCCAAATGAGGCTCTTCTCCCCGAAGAACGAAAGGCGCTGCACAGATCGAGT
CAGAGCAAGCATGCTCAGCACTCACCTCAACATGTTCTGGCCAATGGGCTAGACGTTTCA
CAGTCCATGCAGAACCTCAGTTTAGGGGGCGCATCTGGCTCCGGAGGCCACACCAGAGAA
CCCTCCATGGCGGGCGCATCCGACCGATCGTCGCAGGGCAAGAGCACCCCCACTCTGCAC
GGCGTGGTGCTCTACGACTTCCAAGCCGAGCGGCCCGACGAGCTGCAAGCATCCAAGGGC
GATAACATCATCATTCAGGCCCAATCCAATCACGAGTGGTTTGTTGCCAAGCCCGTTGGC
CGACTGGGAGGCCCCGGTCTGATCCCTGCCTCGTTTATCGAGATCAGAGACATAGTGACA
GGAAAGGCGGTTGTCGACGTGGAGTCTGCCTTACGGGCTTCTGGCTTGCCCAAGGTGGAA
GAGTGGAAAAGGATGGCAGCAGACTACAAGGCGTCCAGCATTGCTCTTGGCAATTTTGAC
GACCCCCAGCAACACTCGCAGCAGCAGGCTCTGCAGCATGCTCTGCGTGGACAGCAGACT
CTGCAGGAACACCAGGTTCAACAGGAACACCAGACTCTGCAAGAAAGACAATCTCTGCAG
GAACAGCAGGCTCTCCGGGAACAGCAGGCTCTCCGGGAAAATTACGCTGCCCCTGCCACT
GGACCTCTCGTTGTAGCGGCGTCCGTCGAGTCGTTTGCATTACACTCGGGTCGATACTGG
TACCTCGTCAACGCAGAGCTGGAGGACGGCTCCATGCGGCGATTGTGCCGATACTACCAG
GACTTCTACGTATTCCAAATCAACCTGCTGGGGGTGTTCGAAGAGGCTGCTGGTCACAAT
GATCAGCCTCGTCTGCTTCCTTTCATGCCCGGGCCTCTTACCTACGTTAACGACTCCATC
TCCATGCAGCGACGTCACAACCTTGACGAGTACGTCCGCAAGCTCATGGCTCTTCCCGCT
TATATTTCACGGTCTGTGATCATGCAGGAGCTGTTTGCTCTCCGCCCTGGTGATGTGGCG
GCCGCCGGTCCCACCGACGACCTTCCACAGCCTCTGACGCCGGAGACCGAGTCGTTTGAC
GCCGCTCAGGCCGAGGCGCGGGCAAAGGGCATTCATCCCAAATCTCTGGGGCCGACTAAT
GTGTCTTCCAGCAGCGTAAGCTATTCGGAAGGCACCGAGGAGTCTCGGCCTGTGAGCACT
GCATCGGGTCTCATGGGTCCTCCTGAACCCACCGGACTCCCCGGCGGCGGACACCAGCGA
ATGACCTCTGTGTCCACGGTGGGTCCCACGCCCGATAACCCCGCCGTCAATACGCCGCAG
TCGTCATCTAACTCGGTCAAGGTGAAGGTTTTCTATCAGGACGATCTGATTGCGATTCGA
GTACCCTCGGACATCGATTACGCTACTCTACACGACCGGTTGTGTGAGCGATTACGGGTC
GAGACGCTGAGTCTACTGTACAAGGCAGATGACGGTAGCCGGGTGGTTATCAGCAACGAT
GAGGATCTGGGCGCTGCAGTGTACGGAAAGAACAAGCTAGTTTTGTACGCTAGTTAAGAG
TGGCCTTTGGGAGTGCTGGAGTCAAATTTCGCGTTTCTGGCTGTTCAAAGCGGGCTTCAA
ACTGTCTGTTTGGTACTATCTGTATAAACTGCGGTTCGAACTATTATAGATCGCTCTTTA
TGCATTGAGCGTCGCGCGTCTTGCACCCAACCCGTTTGAAAACTTGAACCACCACCAGGA
GGTGCGTCCGAAGACGATGTGGGCATTGTGTATTTTAGGTGTAGCATATATTTTTAAGGC
TGTGTTATGATTTGAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F27643g_CDS-001

Protein length: 640 aa.
Product: Bud emergence mediator
Gene: BEM1

>YALI0F27643g_CDS-001 MIKGIRRSLKGEKTTSSGSANSLVSDKNPLHTNPPKMVIRALYDYEPQGPGELSFCKGDF
FHVISNEQDSEWFEAFNPLRNVRGMVPVPYFEVLGKKEGITSPDPNEALLPEERKALHRS
SQSKHAQHSPQHVLANGLDVSQSMQNLSLGGASGSGGHTREPSMAGASDRSSQGKSTPTL
HGVVLYDFQAERPDELQASKGDNIIIQAQSNHEWFVAKPVGRLGGPGLIPASFIEIRDIV
TGKAVVDVESALRASGLPKVEEWKRMAADYKASSIALGNFDDPQQHSQQQALQHALRGQQ
TLQEHQVQQEHQTLQERQSLQEQQALREQQALRENYAAPATGPLVVAASVESFALHSGRY
WYLVNAELEDGSMRRLCRYYQDFYVFQINLLGVFEEAAGHNDQPRLLPFMPGPLTYVNDS
ISMQRRHNLDEYVRKLMALPAYISRSVIMQELFALRPGDVAAAGPTDDLPQPLTPETESF
DAAQAEARAKGIHPKSLGPTNVSSSSVSYSEGTEESRPVSTASGLMGPPEPTGLPGGGHQ
RMTSVSTVGPTPDNPAVNTPQSSSNSVKVKVFYQDDLIAIRVPSDIDYATLHDRLCERLR
VETLSLLYKADDGSRVVISNDEDLGAAVYGKNKLVLYAS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG