YALI0F27621g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0F27621g

Location

Species Yarrowia lipolytica Positions 3503743..3504762
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1020 (nuc.)
Previous locus YALI0F27599g Next locus YALI0F27643g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F27621g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F27621gYALI0F27621g_mRNA-001YALI0F27621g_CDS-001

Nucleotide sequence

 

>YALI0F27621g
ATGGACAGGAAACCAATCCGAATGCTAGGAACCCGGCTCAAGCGGACGCGATCGCGGGAC
GAACAATCGAATGTCAAGCGTGCTCGTCTGATGGATGCCTTTGGGCGTCTCAATCTAGGC
GATCGAATGGACGACGGTTCACTATCTCGACACAACAATGGGGGGGTTCCAGCAACAGCT
CAGGACTCCTTGGAAGATGATCTGTTTGAGGAGAACCCCCATCAAATCGATGACAGTGAC
TACATGGACACTTCCAACAAAGACACAATTTTCATCCCTAGCATTGAACGATACTTGGAA
GACAACCCCGATCCCGTGGATATTATCCCCAGTCAGCAAAATGGACAGTTTCAGATACTT
CCTACAGAACCGCCAACACCAGATATTCTCGCCCGCATTTCTCAGAGACACTTTCAAAAG
GTGTTGGACGGTTACACACACGAGGCACTGGTGCCTTACCAGGGCGGCCCTCAGACAATA
GTGTGGGATAAGTTCTGTCGATGGTGGCTTGGAGATCAGCCCAGAAGGGATGATACAACC
ATGAGCCAACAACAGCAGTTTTACGGCCAACAGTTCCCGAATCAGTTCCCGAATCAGTTC
CCAAATCAGTTTGCGAATCAGTCTTCGGACCAGTTCTCAAACCAGTTCCAAAATCAACAG
GCAGGTCTGTTCCACAATCAACAATCTCCAAACCAGTTTGGATTAGAAACATGGTCAAAT
ACCGGCACGAGACACCACTCAGAGGCCATAGACAACGGAGATATGGATATGGATGTGGAT
ATGGACGAGGATCTGCCAGGGTATACCTTCTACGGCACCAGCGACTTTACTAGCCCAGAT
ACCGTGGTGGGACAGACCGATCCGGACTATATGATGGACGACGATGCCCCCATGGATGGA
ACCAGGAGAAACTCGTTGCATTAATCGGCTCTTCTGAAGTGGGCGTCTACTAACTGTACA
TACTGTAATAACATAGACTGTATACCTATCAGATGGTATACATGTATAACACCAAGTGAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F27621g_CDS-001

Protein length: 308 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0F27621g_CDS-001 MDRKPIRMLGTRLKRTRSRDEQSNVKRARLMDAFGRLNLGDRMDDGSLSRHNNGGVPATA
QDSLEDDLFEENPHQIDDSDYMDTSNKDTIFIPSIERYLEDNPDPVDIIPSQQNGQFQIL
PTEPPTPDILARISQRHFQKVLDGYTHEALVPYQGGPQTIVWDKFCRWWLGDQPRRDDTT
MSQQQQFYGQQFPNQFPNQFPNQFANQSSDQFSNQFQNQQAGLFHNQQSPNQFGLETWSN
TGTRHHSEAIDNGDMDMDVDMDEDLPGYTFYGTSDFTSPDTVVGQTDPDYMMDDDAPMDG
TRRNSLH*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG