YALI0F25861g

Overview

Description weakly similar to uniprot|Q03465 Saccharomyces cerevisiae YDL020c SON1 26S proteasome subunit
Locus type CDS
Locus tag YALI0F25861g

Location

Species Yarrowia lipolytica Positions 3329353..3331185
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1833 (nuc.)
Previous locus YALI0F25839g Next locus YALI0F25883g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F25861g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F25861gYALI0F25861g_mRNA-001YALI0F25861g_CDS-001

Nucleotide sequence

 

>YALI0F25861g
ACCACAAACACACAAACGACCAAGCAAGAATAATTTACACTTCGAAACGCCGCGAGTCAC
AGACGACATCGCAGCACATACAAAGAAATTAATTTGCGGTTCCCTTCATTACTAAGCAGA
ACCGGTAACTACCACAACAGTAAGTTGCACAGACAGGAACAGGAAAATCGCAGTTCCTAC
CACAGCAGTCCAAACACTGCACCTCACATGAACACAACTGACGGTTCTAGAAACTTCGAC
CTACCCCATTCTCCCAAGTTGACTCCCAAGAACAACGGACTCAGTCTCTACTCAACCAAC
AACTCCAGCTCGACTTCTGTCCATTCCACAAACCCACAGTCTCCTATGATAGCATCTGAC
GAGTACTTTCCCAACCTCACGCCGGTCCAGACTCAGCAGAGTGACCAGTTCACCGAGTAC
AACCCCGGCACCCTGGACGTCACACAGCAGCAGCATTACAACATGAACATGGATAACAAC
ATGGCCATGGACCCTCAGATGGATTACTCCTACCTGATGAAGCCCCAATACCCTTACCCA
TGCAACCAAGATATGCTGCCTCTCAACGACAACAACTTTGCACAGACTCTTGCTCCTGCA
GATTCGCTTCTCAAGAAGAACAACAGCTCCACTCCCTGGGACTACCTGAACGCAAACTTC
TACGCCGGTCAGCCCGAGGATCAGGGTCTGGAGTTCTTCATCAACAACGAGCAGCCCCAG
CAGTTTGTTCCCTACACCAATGAGATTGACCTCAATTACGACGCTGCTCCCGAGGTGGAG
GACGACGACGACGATGAGATGTGTGACGAATTTGACGATTTGCATGAGTACATGGAGAAC
GAGGATATGGATCTGGATATCGACCTCGACCAGTTCGAGGCTCCTCCTCTCGAGTACGAT
ACTCCCACTCTCCACACCCAGCATACTCCCTACCAGCATCAGCCACCTGTTCTCGAGCAG
CAGCAGCAGCATCTTCAGCAGCAGCCTCTTGAGCAGATGGACCTCCAGCACCAGACACAG
ACACAGCCTCAGCAGCTCGACCAGCCCCAACACGTGCATATCGAGCAGCAGCCTGTCTAT
CAGCCTGAGCCCCTCGTTGAGGAGCCTGTTAGTCCCGCTGGCACTTCTGGTCCTGCTGAC
GTCTCGCCTCACAACCCCAACATTCCAAACTTTTCGTCGTTGTCGCTGGAAGACACTCTG
TACGAATCCAACCCCAGCACAACCTCTCTCGGCAAGGACTCCGACTACTTGTTTGAGCCC
TCCTCCAGCAGCACCACATCTTCGCCTGGCTTCAACGACACGGACTCAGTGTCTACTGTT
GAGCCTGTCGCACGAACTCGACGACGAAAGCCGGTGACCGGCCAGTCCGAGGGACGAGTG
CATCTGTGCGAGCATATGGATTCTTCTGGAAGCCCTTGTGGAAAGGTGTTTTCTCGACCC
TATGATCTGATTCGACACCAGGATACCATTCATGCTGCTGTTCGAAAGACGTACAAGTGC
GAGCACTGTGGAGACGACAGCAAGACCTTTAGCCGAATGGATGCTCTGTCTCGACACATT
CGAGTCAAGCACTCCAAGGAGTCCAAGGCATAATTTTTTACACATACATACACATACCTC
CGGGATAAGTATTGTGATGATAGCATACATTATTCCTGCTTAACAGTATTTATTTGCATA
TAGACAATACCACTAACTGACTTGATGACATCATACATATCAACAAGACGTTCAAACGAC
GGTCAGCGCGACAATGGTCAAGAGCGGAGGAATTTTTTTGGTAAGAGACTAGATGTTATA
ATTGATATTAATGAATGAAAAATAATTGATGTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F25861g_CDS-001

Protein length: 416 aa.
Product: Conserved hypothetical protein

>YALI0F25861g_CDS-001 MIASDEYFPNLTPVQTQQSDQFTEYNPGTLDVTQQQHYNMNMDNNMAMDPQMDYSYLMKP
QYPYPCNQDMLPLNDNNFAQTLAPADSLLKKNNSSTPWDYLNANFYAGQPEDQGLEFFIN
NEQPQQFVPYTNEIDLNYDAAPEVEDDDDDEMCDEFDDLHEYMENEDMDLDIDLDQFEAP
PLEYDTPTLHTQHTPYQHQPPVLEQQQQHLQQQPLEQMDLQHQTQTQPQQLDQPQHVHIE
QQPVYQPEPLVEEPVSPAGTSGPADVSPHNPNIPNFSSLSLEDTLYESNPSTTSLGKDSD
YLFEPSSSSTTSSPGFNDTDSVSTVEPVARTRRRKPVTGQSEGRVHLCEHMDSSGSPCGK
VFSRPYDLIRHQDTIHAAVRKTYKCEHCGDDSKTFSRMDALSRHIRVKHSKESKA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG