YALI0F25839g

Overview

Description similar to uniprot|Q02933 Saccharomyces cerevisiae YPL123c RNY1 ribonuclease T2
Locus type CDS
Locus tag YALI0F25839g

Location

Species Yarrowia lipolytica Positions 3327271..3328194
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 924 (nuc.)
Previous locus YALI0F25817g Next locus YALI0F25861g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F25839g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F25839gYALI0F25839g_mRNA-001YALI0F25839g_CDS-001

Nucleotide sequence

 

>YALI0F25839g
ATGAAGTTCTCTTCTGTTCTTGTTGCCTTTCTCGCTTCCTTTGTTGTTGCTGAGGAGCAG
CCCGCCTGTGGTGTCCCCATTGTCTACCGACTCTTCACTCAGCCTGAGCTCTCGGCTCCT
CTCCACAAGGACTGTCCTGCCAACGCTGACCTTCCCCTGTCTTGTTCCAAGGAGATCACC
GACAAGGACTCTCTCTGTTGCGTTCAGCAGCCTGGTGGACTCGTTCTCCTAGCCCAGTTC
TGGGACTACGATCCCGGCTTCGGCCCCGAGGATGCCTTCACCCTCCACGGACTGTGGCCC
GACAACTGTGACGGCACTTATCAGCAATACTGCGACAAAGAGCAGGAGGTGTCCAACGTG
ACCGACATCATCAAGAAGCTCGAGCCTTCTCTGCTCGACTACATGAACGAGCATTGGGTC
TCTGACGACGGCGACAATGAGTCCTTCTGGGAGCACGAGTGGAACAAGCACGGAACTTGC
ATGTCCACCCTCAACCCCAGCTGTTACAAGGAGGGCACTGACAAGCACCAGAATGTTGCA
GACTACGCCCGAACTGCCATCGCTCTCCAGAAGGAGCTCAACACTTTCGGGTTCCTCGGA
TCCAAGGGCATCTGGCCTTCTGATGACAAGACCTACCCCAAGCAGGACATCGAGGCCGCG
CTCAAGTACCACCACTCCAACTCCAAGGTACACATTGCCTGTGACAAGTCCGGAGCCCTC
AACGAGGTCTGGTACTACTTTCATATCCAGGGTGCCATTCCTTCCGCCGAGTACACTCCT
GTCGATGATACTATTCCTAAGAACAACTGCCCAGACCAGGTCAAGTACCTGCCCAAGAAA
TTCAACAGCACCAAGCCCGCTACCGGCTACTAACCGCTCCTACTCCTGAAAAACCTCCGT
AAATAACTTATTCATTGATTACTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F25839g_CDS-001

Protein length: 291 aa.
Product: Vacuolar RNase of the T(2) family, putative

>YALI0F25839g_CDS-001 MKFSSVLVAFLASFVVAEEQPACGVPIVYRLFTQPELSAPLHKDCPANADLPLSCSKEIT
DKDSLCCVQQPGGLVLLAQFWDYDPGFGPEDAFTLHGLWPDNCDGTYQQYCDKEQEVSNV
TDIIKKLEPSLLDYMNEHWVSDDGDNESFWEHEWNKHGTCMSTLNPSCYKEGTDKHQNVA
DYARTAIALQKELNTFGFLGSKGIWPSDDKTYPKQDIEAALKYHHSNSKVHIACDKSGAL
NEVWYYFHIQGAIPSAEYTPVDDTIPKNNCPDQVKYLPKKFNSTKPATGY*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG