YALI0F25399g

Overview

Description highly similar to uniprot|P0C0W1 Saccharomyces cerevisiae YLR367w RPS22B ribosomal protein
Locus type CDS
Locus tag YALI0F25399g

Location

Species Yarrowia lipolytica Positions 3266390..3267403
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1014 (nuc.)
Previous locus YALI0F25355r Next locus YALI0F25421g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F25399g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F25399gYALI0F25399g_mRNA-001YALI0F25399g_CDS-001

Nucleotide sequence

 

>YALI0F25399g
CCAAACGTATGTACTTCACTGCCCTCGTTTTACCTCACTAGAAAATCGTGGTTATGTGTT
GAATCTGTTTATGGAAGACGGTGGTAATGCCGCTTTCTTTGATTGACACTTCAACACACT
CTGCGACACTTCTAGTGTGGCGTTGCTACTCGCGACATGCCACATGAAATCCCTCCCCGG
ATACTCTTGTGGTTTTCACCCACTAACAACAGGTCCCACTTAACTCAGCACATATCTCAC
AATGACTCGAACCTCTGTTCTTGCTGACGCCCTCAAGTCCATCACCAACGCCGAGAAGGC
TGGTAAGCGACAGGTCCTGATTCGACCCGCATCCAAGGTCATCATCAAGTTCCTGCAGGT
CATGCAGAAGCATGGTAAGTACTCCTTACGCCGACGCGTCGTCTGACTCGTTTTTTTCTC
TTTGCTCTTGTTACTAAGAGCACCCGGGCTGATAACTGGATGGATTGTCTGAACACTGTC
TCTCTCTGTCTTTTAATTGTCCGGGAAATTAATAAAGGCACTTACACGCTGTCACTGAAA
CCCTCTGGTGTTCGGTGTTTATATGCCGGTTACATTCCTCCTTATTTCATTCTTTTGATA
TAAGATACACCCCAGCATTTCCACGAATGTTTTTACTAACTTCAGGTTACATCAACGAGT
TCACCTACGTTGATGACCACCGATCCGGCAAGATCGTTGTCGAGCTGAACGGCCGACTCA
ACAAGTGTGGTGTCATTTCTCCCCGATTCAACGTCAAAATTGATGATATGGAGAAGTGGG
TCCAGAACCTGCTGCCTTCTCGACAGTTTGGTTACATCATCCTGACCACTTCTGCCGGAA
TCATGGACCACGAGGAGGCCCGACGACGACACGTTGCTGGAAAGATCCTCGGTTTTTTCT
ACTAAGTTATTTAGCAGAATATCCACCCTAAAAGACGCTTATCGTCACTATTTATATTGA
AAGAATTGTTTACAATAAGCTAGTTAGTTAAATGGTATACCATCACTACGTAAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F25399g_CDS-001

Protein length: 131 aa.
Product: Ribosomal 40S subunit protein S22, putative

>YALI0F25399g_CDS-001 MTRTSVLADALKSITNAEKAGKRQVLIRPASKVIIKFLQVMQKHGYINEFTYVDDHRSGK
IVVELNGRLNKCGVISPRFNVKIDDMEKWVQNLLPSRQFGYIILTTSAGIMDHEEARRRH
VAGKILGFFY*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG