YALI0F25289g - SSA5, SSA-C

Overview

Description uniprot|Q6C0E9 Yarrowia lipolytica YALI0F25289g SSA5/SSA-C HSP70 protein
Locus type CDS
Gene names SSA5, SSA-C
Locus tag YALI0F25289g

Location

Species Yarrowia lipolytica Positions 3258528..3260539
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 2012 (nuc.)
Previous locus YALI0F25267g Next locus YALI0F25311r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F25289g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F25289gYALI0F25289g_mRNA-001YALI0F25289g_CDS-001

Nucleotide sequence

 

>YALI0F25289g
ATGCCTAACACATCTGTAGGAATTGACCTGGGAACCACATACTCTTGTGTGGCTCACTTT
GCCAACGACCGAGTCGAGATCATCGCCAACGACCAGGGTAACCGAACCACCCCCTCGTTC
GTTGCCTTCACTGATACCGAGCGACTCATTGGTGATGCCGCCAAGAATCAGGCCGCCATG
AACCCCTCCAACACTGTCTTCGACGCCAAGCGACTCATTGGCCGAAAGTTCTCTGACCCC
GAGGTCCAGAACGATGCCAAGCACTTCCCCTTCAAGATTGTTGACAAGGGAGGAAAGCCC
AACATCGAGGTGGAGTTCAAGGGTGAGACCAAGGTCTTCACCCCCGAGGAGATCTCTTCC
ATGATCCTCACTAAGATGAAGGAGACCGCTGAGGGCTACCTCGGTGGAAAGGTCACTGAT
GCCGTCATCACTGTCCCTGCTTACTTCAACGACTCCCAGCGACAGGCTACCAAGGACGCT
GGTCTTATTGCCGGTCTCAACGTCCAGCGAATCATCAACGAGCCTACCGCAGCTGCCATT
GCCTACGGTCTGGACAAGAAGGAGGCTGGTGAGCGAAACGTTCTCATCTTCGATCTTGGT
GGAGGAACTTTCGATGTCTCCCTCCTCTCTATCGAGGATGGTATTTTCGAGGTCAAGGCC
ACCGCTGGTGACACCCATCTTGGTGGTGAGGATTTTGATAACCGACTCGTCAACCACTTC
GTCCAGGAGTTCAAGCGTAAGCACAAGAAGGATATCTCCACCAACCAGCGAGCTCTCCGA
CGATTGCGAACCGCTTGTGAGCGAGCCAAGCGAACCCTGTCTTCTTCCGCCCAGACCTCC
ATCGAGATCGACTCTCTCTACGAGGGTATTGACTTCTACACCTCCATCACCCGAGCCCGA
TTCGAGGAGCTCTGTCAGGATCTCTTCCGAGGTACTCTCGAGCCCGTCGAGAAGGTCCTC
CGAGACTCCAAGATCGACAAGTCCGCCGTCAACGAGATCGTTCTTGTCGGTGGTTCCACT
CGAATCCCCAAGGTCCAGAAGCTTGTCTCTGACTTCTTCAACGGTAAGGAGCCCAACCGA
TCCATCAACCCCGATGAGGCTGTTGCCTACGGTGCTGCCGTCCAGGCCGCTATCCTCTCC
GGAGATACTTCTTCCTCCACTCAGGATCTTCTCCTTCTCGATGTTGCTCCTCTCTCTCTT
GGTATTGAGACTGCCGGTGGTGTTATGACCAAGCTCATCCCCCGAAACTCCACCATCCCC
ACCAAGAAGTCCGAGACCTTCTCCACTTACGCTGACAACCAGCCCGGTGTCCTGATTCAG
GTCTTCGAGGGTGAGCGAGCCCAGACCAAGGATAACAACATCCTTGGTAAGTTCGAGCTG
TCCGGCATTCCCCCTGCTCCCCGAGGTGTCCCCCAGATTGAGGTCACCTTCGACGTCGAC
GCCAACGGTATCCTCAACGTTTCCGCTGTTGAGAAGGGTACCGGTAAGACTCAGCAGATC
ACTATCACCAACGATAAAGGCCGACTTTCCAAGGAGGATATTGAGCGAATGGTCAACGAT
GCTGAGAAGTACAAGGAGCAAGATGAGGCCGAGGCTGCTCGAATCGCCGCCAAGAATGGT
CTCGAGTCCTACGCCTACTCTCTCAAGAACACCCTCTCCGAAGAGAAGTTCAAGGAGAAG
GTTGACGAGGCTGACCGAGAGAAGCTCGAGAAGGCCATCAACGAGACCATTGAGTTCCTT
GACTCTACCCAGTCTGGTGCTACTGAGGAGTACTCCGACAAGCAGAAGGAGCTTGAGGGT
GTTGCCAACCCTATCCTCATGAAGTTCTACGGAGCCGAGGGTGGTGCTCCCGGCGGAATG
CCTGGTGCCGGTGGCCCCGGTGGCTTCCCCGGTGCTGGTGCTGGAGGTGCTCCTCCTCCC
GGCGCTGGCGGCGAGGGCCCCACTGTCGAGGAGGTCGACTAAGTATTTTAGTACCTTGTA
TTTATAGAAAATTGATTATTAGACAGACATTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F25289g_CDS-001

Protein length: 654 aa.
Product: HSP70 protein
Gene: SSA5, SSA-C

>YALI0F25289g_CDS-001 MPNTSVGIDLGTTYSCVAHFANDRVEIIANDQGNRTTPSFVAFTDTERLIGDAAKNQAAM
NPSNTVFDAKRLIGRKFSDPEVQNDAKHFPFKIVDKGGKPNIEVEFKGETKVFTPEEISS
MILTKMKETAEGYLGGKVTDAVITVPAYFNDSQRQATKDAGLIAGLNVQRIINEPTAAAI
AYGLDKKEAGERNVLIFDLGGGTFDVSLLSIEDGIFEVKATAGDTHLGGEDFDNRLVNHF
VQEFKRKHKKDISTNQRALRRLRTACERAKRTLSSSAQTSIEIDSLYEGIDFYTSITRAR
FEELCQDLFRGTLEPVEKVLRDSKIDKSAVNEIVLVGGSTRIPKVQKLVSDFFNGKEPNR
SINPDEAVAYGAAVQAAILSGDTSSSTQDLLLLDVAPLSLGIETAGGVMTKLIPRNSTIP
TKKSETFSTYADNQPGVLIQVFEGERAQTKDNNILGKFELSGIPPAPRGVPQIEVTFDVD
ANGILNVSAVEKGTGKTQQITITNDKGRLSKEDIERMVNDAEKYKEQDEAEAARIAAKNG
LESYAYSLKNTLSEEKFKEKVDEADREKLEKAINETIEFLDSTQSGATEEYSDKQKELEG
VANPILMKFYGAEGGAPGGMPGAGGPGGFPGAGAGGAPPPGAGGEGPTVEEVD*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG