YALI0F25267g

Overview

Description similar to uniprot|Q07953 Saccharomyces cerevisiae YLR022c unknown function
Locus type CDS
Locus tag YALI0F25267g

Location

Species Yarrowia lipolytica Positions 3257402..3258388
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 987 (nuc.)
Previous locus YALI0F25245g Next locus YALI0F25289g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F25267g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F25267gYALI0F25267g_mRNA-001YALI0F25267g_CDS-001

Nucleotide sequence

 

>YALI0F25267g
ATGGCCGGAATTCAGCAACCATCCGGACAGATCAAACTGACCAACGTGGCTCTTGTGCGA
CTCAAGAAGGGCCGAAAGCGATTCGAGATCGCTTGTTACCAAAACAAGGTCCAGGACTGG
CGTAAGGGAGTGGAAACCGACCTTGATGAGGTTCTTCAGATCCCTCAAGTCTTTGTCAAT
GTCGGTAAGGGACAAACTGCGCCTCGAGACGACATGAAGGCCGCCTTTGGACATACTGAC
CAGGACAAGATCATTCTGGAGATTCTCAATACCGGAGAACTCCAGCTTGGAGAGAAGGAG
CGACAGCAGCAGAGCAACCAGCTGCAAACGGAGATCATCCAGCTTGTGTCGCAAAAATGT
GTCAACTCCAAGACCAAGCGACCTTATACTGCAACCATGATTGAGAAGGCTCTGATTGGA
GAGCTCAAGTTCAACATTGTGCCCAAGAAATCCGCCAAGATCCAGGCCATGGATGCCATC
AAGCTGCTGGTGGAGAAGCAGATCATTCCCATTGCTCGAGCTCGTATGCGAATTCGAGTG
ACTGGCGATGTCAAGAAGCTGGGGCTAGGAGAGAAGCTCAAGACCGATATGGGAGCCACA
GTCGAGGAGGAGACCCACGACGAGCTGGTCTGCTCCATTGATCCTGGTCAGTTCCGACCC
GTGAACGAGTTTGTTTTGGCTGAGGTCAAGGGCAAGTGCAAGGTCGAGGTCATGGAGGTT
GCTGTTCAGAATTAGCCAGTGATCAGATGCCAAGCAACTGAAGCAACTACCCACAGTCTG
ACATGGTGCCCCAACAGCGAAGCGCAAGCTCTCTATGGGCCTCCACTTGGGCCTCCACTT
GTCTCTTTAGGACATGGGACATGATATGCGTGTAGCCTATTCCTCGGGGCTCTCTGCATA
TGGGGAACATGCCACTGCTACTTGTAGTACACAGATAGTTACAGTACTGTCAAAACACCA
TATATTTAATGTATATTTACAGAGCAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F25267g_CDS-001

Protein length: 245 aa.
Product: Guanine nucleotide exchange factor (GEF) for Ria1p, putative

>YALI0F25267g_CDS-001 MAGIQQPSGQIKLTNVALVRLKKGRKRFEIACYQNKVQDWRKGVETDLDEVLQIPQVFVN
VGKGQTAPRDDMKAAFGHTDQDKIILEILNTGELQLGEKERQQQSNQLQTEIIQLVSQKC
VNSKTKRPYTATMIEKALIGELKFNIVPKKSAKIQAMDAIKLLVEKQIIPIARARMRIRV
TGDVKKLGLGEKLKTDMGATVEEETHDELVCSIDPGQFRPVNEFVLAEVKGKCKVEVMEV
AVQN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG