YALI0F24761g

Overview

Description similar to uniprot|C5MB93 Candida tropicalis CTRG_03335 conserved hypothetical protein
Locus type CDS
Locus tag YALI0F24761g

Location

Species Yarrowia lipolytica Positions 3211298..3212856
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1559 (nuc.)
Previous locus YALI0F24739g Next locus YALI0F24783g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F24761g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F24761gYALI0F24761g_mRNA-001YALI0F24761g_CDS-001

Nucleotide sequence

 

>YALI0F24761g
ATGGAACCCGGTGTTTTCCACCTCAAACAAACCACGGCCTTCTACGGCTCGTGTCTGTTG
ACCATTGCGTTTGTCGTCTTTCTGTCCGCAACCCAGCCCTTCATTCTCACCGACCTGCTG
GGCTACCGAAAGAAGGTGGCGACCCATGTAGGCAATCTCGCTGTCGCCGACGAAATTGTC
AGCATCATCGTCGCTCCTGCTCTGGGAGCCCTCAGTGACAAGATTGGCACCCGAATCGTC
ACATCTGTCGGAGTGTGTATCATTGGCACCTCCATCATGCTCTATACAACACGGCAGACG
TTGTACCCGGACATTCTCATTTTCCGATGTCTTTTCTCCGTCGGTGCCTCGGCTGCGGGC
TCCATGATCACCGCCATGCTCTCCGAAATCTCCCAGTCCACCATCTCCTTCTCCTTCTTC
GGCTTCCACTTCCACTCAGATCCTCCGGAGGCTGGCTACGAAACCGACCACGATAAGAGA
AAGGCCATTCTTCCCGTTCTTGTCGGCATTTCAACTGGCCTGGGAGCCGTATTTTCGCTT
CTGGTCTTCCTGCGACTTCCCAGCCAGTTCCCAGACCTCTCCAAGGGAGACGCCCTGCAG
CGATCGTATTTCATTGTTGGAGCTATCGCCATTGTTGCCTCCGGAATTCTTTTCCTGACT
CTTTACCAGGATCCCAACAAGAGTCTCAAGGGCTGGATTCGTCAGCAGCGAGGTTTCTCC
ATCTCCGCCTCTGTCAACAATGAAGAGCGTCCCGAAGAACAGGCCGTGCAGGTGACTACT
CCTCCCTACGGAGAACTCATCAAGCAGGGCTTTGTGGAAATGACCAAGGAGCGATCTGTA
ATGCTTGCCTACGCCGGCGGATTTGTTGCAAGATCCACCACTGTGGCCACGGCCGTCTTT
ATCCCCACCTTTGTCAATCAGTGGTACCACAACAACGGCTACTGTGGCCCTGACAGAAAT
TACAAGGGAACCGACCGATGTGAGGAGGCTTACGTTATGGCTTCCATCATCTCCGGAGTC
ACCCAGCTGGTGGCTCTGCTCACTACTCCCGTCTGGGGCTTCGCCGTCAGCAAGTTTGGT
CGAACGATCTGTATCACTGCTGCTGCTTTGTTTGGTCTTATTTCCTCGTGGATTCTTTGT
CTCATTGACTCTCCCCAGACTGCCTGGTTCATGGTTTTCTGTGGCTTCATTGGTGTTGGC
CAGATTGGAGTTATCATCACCTCCATGAGCTACTGCACCGACGTGCGTGCAGAGATTCGA
GGTTCCATTGCCGGAGTCTACTCTCTCTTTGGAGGAGCCGGTATTCTGATTCTCACAAAG
GTCGGCTTTGCTTTGTCGGACGAGTGGGCTCATGCTGGCTTCTTTGTGCTGGGAGCCTTT
GATCTGATGCTTCTATCCGTCATCTTCTTTTCTTCCAAGTTTGGACAGGGCTTTATTCGG
GAAATTCCCAGCGTGCACCTGTAAAACAAACCAAGTCCACGCCGAGCGAGTCAGATCTCG
CTGCATTTATGAGACACGATATATAATGATAATGAATAACGATTGATGAGGTGTATGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F24761g_CDS-001

Protein length: 488 aa.
Product: Conserved hypothetical protein

>YALI0F24761g_CDS-001 MEPGVFHLKQTTAFYGSCLLTIAFVVFLSATQPFILTDLLGYRKKVATHVGNLAVADEIV
SIIVAPALGALSDKIGTRIVTSVGVCIIGTSIMLYTTRQTLYPDILIFRCLFSVGASAAG
SMITAMLSEISQSTISFSFFGFHFHSDPPEAGYETDHDKRKAILPVLVGISTGLGAVFSL
LVFLRLPSQFPDLSKGDALQRSYFIVGAIAIVASGILFLTLYQDPNKSLKGWIRQQRGFS
ISASVNNEERPEEQAVQVTTPPYGELIKQGFVEMTKERSVMLAYAGGFVARSTTVATAVF
IPTFVNQWYHNNGYCGPDRNYKGTDRCEEAYVMASIISGVTQLVALLTTPVWGFAVSKFG
RTICITAAALFGLISSWILCLIDSPQTAWFMVFCGFIGVGQIGVIITSMSYCTDVRAEIR
GSIAGVYSLFGGAGILILTKVGFALSDEWAHAGFFVLGAFDLMLLSVIFFSSKFGQGFIR
EIPSVHL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG