YALI0F22077g

Overview

Description some similarities with uniprot|O43076 Schizosaccharomyces pombe Hypothetical 52.4 kDa protein
Locus type CDS
Locus tag YALI0F22077g

Location

Species Yarrowia lipolytica Positions 2921042..2922862
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1821 (nuc.)
Previous locus YALI0F22055g Next locus YALI0F22099g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F22077g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F22077gYALI0F22077g_mRNA-001YALI0F22077g_CDS-001

Nucleotide sequence

 

>YALI0F22077g
ATGATCACTCCCGACTTTACTGTGGATCAGGACGAGGACTTTGTGTTCGTGAACATCAAG
GCACCCCATATTCGTGTCGCCAACATCGAGATTGTGGTGGATGGCGAGCTCTTCGTGTTC
TCGTTAGCACCCTATTATCTGCGGTTGCGATTTCCTGGTCGACTTTTGGACGAAGATGAG
GAGGAGGTAGAGATGGTAAAGAAGCAGATCAGCGATGCCAATCTCGATAAAAAAACATTG
GGTCCAGGTGATCCGAAATCAGACGACAATTCGACCGACAAGAAGGAGGCTACTCTGATT
GAAGAGGTGTCGACCAAGCCTCTGATAGAAGAGATCACAGAGACTAAGAAGGAATCGGAA
CCTAACGCCAAGAAGCGAAACTACGACGAGATGGCCACGTCGACTTTGGTGGAAGAGGTT
CGGCCCAGCAAGTTTCTTCTGGAAGAGAACACCTCTCAGCCTCTAGTTGAGGAGGTGGAG
CAGGTCAAGGTCAAGCCTCTGGTTGAGGAAGTTGGCGGTGGAGGGCTGCTAATTGAGGAC
ATCACCGAGAAGACGGACGGCGACGAGGCTGTCACTAAAATCGACATCAAGAGGCGTCCA
AAGGTGACCAAGGCTACTGCTACATACGATCTGGGAAGCTCTACCATCAAATGTCGAATC
CCCAAGGAGGAATCTGGTATGTGGAAGGACATTGATATGATTGGAAAGCTTCTGGCTCGT
CAGAATGAGACCCAAGTGATGGACGATCTTCGAAAAACTGTCATTGAGGAGCTGGATGGA
AATGACAACGAGACTGAGCCTACAGAGCTCCAGGAGGCTGATGCATTTGACTGGGAGATC
AAACAGGAAATCCCGAAGCTGGGTGAAGACAGCCACGTTCGATACGGCTGGCAGGGAGGA
TACAACGGTGCTGTGGGTGTCAGTGTGGCTAAGGGTAACGATGTTAACGAGATCGTTGAT
CCTGAGATGAACGGAGTCGACGAGGAGGCTAGAAAGGAGCTGAGAACAGACATTGAACAG
TCACGTTTTAACCCAGGCTACTATCTATCCGATCTGCTTGAGAACGATATGGTTCCCGAG
TATCTTCATTACGAGCTTCCTAAGGAATTTTGGAAAGAGAACAAGAGCGACATGTTATTG
TCAGGCGAAGAGAATCGTGTTCTGAGCGAGATTATGTCAAAATCTCGGTCGAAATCAGCG
TACAAGAACATTTCCGATCCTAAAAAGGCCTACATTGGACTGTTAAACCTTCTGTTCTCC
TTCTTTTACGACATTCGAACCACATTCAACGATCATACTGTCGAATCCCCATGGACGATT
GGTAAGTTGACTCCTCAGTTTGCCTCTTTGGATGATTCTTTCTACACCGTCTCTGAAGCT
GTGATTGCGAGCAGTAGACGTGCGCTCACGTATCCCCTGGTGCGAAGTTTCGGACTGGTT
CTTGAGATCTGGAAGGATGTTTCCAAGGTGATCAAGTCTGGCAAGCGGGCTATTCTCAAG
GTGCTTCTGGAGCTGTACAAGCTCTTCTCAGTGCACGACCTCTATTATGTTTATGCTGAC
ATCTGGCTTAAGGACTACATTGGATGGATCCAGTATGCCAGCGACAAGGTGTTGGATTCG
CTGGCCGAGGAGTTGGACAAGTTTGTTTTGACGAAGGAGATGCTTGGGTTTGATTTGGAG
GAGTGGGAGCGGAAGGCTGAAGAGGGCGAAATTGAGCCTGAAACAGGTGAGTCTGAAGAG
CAGCAGCGGTAGATACTTGCTCCTAATAGAAGGAAGGGTTATAGATGGAAAGAAATAATA
ACATTATACAATGCAGGATGC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F22077g_CDS-001

Protein length: 584 aa.
Product: Conserved hypothetical protein

>YALI0F22077g_CDS-001 MITPDFTVDQDEDFVFVNIKAPHIRVANIEIVVDGELFVFSLAPYYLRLRFPGRLLDEDE
EEVEMVKKQISDANLDKKTLGPGDPKSDDNSTDKKEATLIEEVSTKPLIEEITETKKESE
PNAKKRNYDEMATSTLVEEVRPSKFLLEENTSQPLVEEVEQVKVKPLVEEVGGGGLLIED
ITEKTDGDEAVTKIDIKRRPKVTKATATYDLGSSTIKCRIPKEESGMWKDIDMIGKLLAR
QNETQVMDDLRKTVIEELDGNDNETEPTELQEADAFDWEIKQEIPKLGEDSHVRYGWQGG
YNGAVGVSVAKGNDVNEIVDPEMNGVDEEARKELRTDIEQSRFNPGYYLSDLLENDMVPE
YLHYELPKEFWKENKSDMLLSGEENRVLSEIMSKSRSKSAYKNISDPKKAYIGLLNLLFS
FFYDIRTTFNDHTVESPWTIGKLTPQFASLDDSFYTVSEAVIASSRRALTYPLVRSFGLV
LEIWKDVSKVIKSGKRAILKVLLELYKLFSVHDLYYVYADIWLKDYIGWIQYASDKVLDS
LAEELDKFVLTKEMLGFDLEEWERKAEEGEIEPETGESEEQQR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG