YALI0F22055g

Overview

Description similar to uniprot|P40487 Saccharomyces cerevisiae YIL103w
Locus type CDS
Locus tag YALI0F22055g

Location

Species Yarrowia lipolytica Positions 2919255..2920655
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1401 (nuc.)
Previous locus YALI0F22033g Next locus YALI0F22077g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F22055g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F22055gYALI0F22055g_mRNA-001YALI0F22055g_CDS-001

Nucleotide sequence

 

>YALI0F22055g
ATGTCGTGTTCAGCATCTGGTGAGTGTAAGAGTACGACTGCCACCCCGGTAGCTCCCTGT
GACCCCGATACATGCAAAAAATCAACTTCCACACAGCCCCGAAAGCGTTTTGTGGGCCGT
GCTAACGGCTCAGGGCCCTCTGCATCCACTTCTCTCGTCAAGAACACTACCAGACGTCCA
CGAATCATTAACCAGATTCCCGACGAGATTCTGAACGATGAGGAGCTCAATGAAGTGATT
GCAACGACGCTGCCCAAAAACTACAACTTTGAGATCCACAAGAGTATTTGGCACATCCGA
AAGAACAACTGCAAGAAGATTGCCCTTCAGATGCCCGAGGGTCTTCTCATTTACGCCTGC
ATCATTTCCGATATTATTGAGCAGTTCTGTGGACCCGATATTAGTACAGTTGTCATGGGA
GATGTGACTTATGGTGCATGCTGCGTTGATGACTTCTCAGCTATCGCCCTGGGATGTGAC
TTCCTGATTCATTATGCACACTCCTGTCTGGTTCCCATCGACTCCATCAAAATCAAGGTC
CTTTATGTCTTTGTCACCATCGAGATTGATACTGACCATGTCGTTAAGTCGTTCAAGAAG
AATTTCGAGACTGGAACTCGCATGGCCATGGTGGGAACCATCCAGTTCAACCCTACCATC
CACACACTCAAGGATCGACTCCTAAACGAAGCTGGAATCGTATGCACTGCTCCTCAGATC
ATGCCTCTGTCGAAAGGTGAGGTTCTGGGATGCACTTCTGCAAACATGTCTACTGAAGAT
TACGATATGATTATGTACATCGGAGACGGAAGGTTCCATCTCGAGTCAGCCATGATCCAC
AACCCCGACATACCTGCATACAGATACGATCCCTACTCAAGAAAGCTCACTAGGGAGTAC
TTTGACCAGGTTGAGATGGTCAGCGTGCGAAAACGCGCCATCCAGACAGCCAAGAACGCC
AAGACCATAGGACTCATTCTGGGGACCCTGGGACGACAGGGAAACACTGCTACTCTGGAT
ATGCTGCAGGAGAAGCTCAACTCTAAGGGCTATGAGACACACATTGTTCTTCTGAGTGAG
ATCTTCCCAGCTAAGCTGGCCTTATTCGACGGTGTTGACGCGTGGGTGCAGGTTGCGTGC
CCCCGTCTTTCTATTGATTGGGGCTACGCATTCCCTAAACCTCTGCTGACTCCCTACGAG
GCGATGGTTATGATGGACGAGGACACTTTAGAGGGTAACGACTACCCCATGGATTACTAT
GGAAAGGAGGGATATGGACGAGGTAAGCAGCCTCGAGCAAAGAAGGAGATTGCCATTTAG
AGAGGAGCAATTGGGGGTTTGACACAGCCGATGGTATCAGTGTGTCTATATAAAAGTAAC
AGGTGTATATATATATTAGGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F22055g_CDS-001

Protein length: 440 aa.
Product: Protein required for synthesis of diphthamide, putative

>YALI0F22055g_CDS-001 MSCSASGECKSTTATPVAPCDPDTCKKSTSTQPRKRFVGRANGSGPSASTSLVKNTTRRP
RIINQIPDEILNDEELNEVIATTLPKNYNFEIHKSIWHIRKNNCKKIALQMPEGLLIYAC
IISDIIEQFCGPDISTVVMGDVTYGACCVDDFSAIALGCDFLIHYAHSCLVPIDSIKIKV
LYVFVTIEIDTDHVVKSFKKNFETGTRMAMVGTIQFNPTIHTLKDRLLNEAGIVCTAPQI
MPLSKGEVLGCTSANMSTEDYDMIMYIGDGRFHLESAMIHNPDIPAYRYDPYSRKLTREY
FDQVEMVSVRKRAIQTAKNAKTIGLILGTLGRQGNTATLDMLQEKLNSKGYETHIVLLSE
IFPAKLALFDGVDAWVQVACPRLSIDWGYAFPKPLLTPYEAMVMMDEDTLEGNDYPMDYY
GKEGYGRGKQPRAKKEIAI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG