YALI0F21901g

Overview

Description similar to uniprot|D5GBL0 Tuber melanosporum hypothetical protein
Locus type CDS
Locus tag YALI0F21901g

Location

Species Yarrowia lipolytica Positions 2898258..2899859
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1602 (nuc.)
Previous locus YALI0F21879g Next locus YALI0F21923g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F21901g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F21901gYALI0F21901g_mRNA-001YALI0F21901g_CDS-001

Nucleotide sequence

 

>YALI0F21901g
ATGCCCGGTGTAGCGTCCTCGTCGTCCTCAACATTTTCGTCTACCAGCAGGTTCAAAAAC
GCCCGGCAGCGGCTGAGCCGGCTCATGAGTCGTCTGCCTTCATTCTCATCTGACGCACGT
GACGGCTTCCGCAACGGCTTTGTCAATATCAACGGCAGCGTCGCGAGTGGATGGGGGGCC
TCTTCTTCCTCTTCCAGCAGCACTCCTGTGGTCAAAAAGCGAGACAGAGAAGAGACTGCA
ACCACCCCACCGGCTGCCCCAACCACAAAAACGCCCAAACGAGTATCCACCTCGCCGTCC
ATCACGTCGTCGGCGCTGTCTCGGTTCTCATGGTCCGAAAGCGAACACCGACGCACACTG
TCGTCAAAACTCTTTTACTCGCCACAAAGAGTCATTGGAGAAACCGAGTCAGGAATCGCC
TTCATCGACGATGTGCCCCAGGGCACGGACTTTGTGTCGATTCTCCCGACGGAAATCTCC
TTCTCTATTTTTGCATTGTTGGACCCACTGGACCTCGATAACTGTGCCCTAGTGTCCCGC
GACTGGAACCGGGCCATTAATAGCGATCCGCTCTGGCGCCAAATGTTCTACCAGAACCGA
TGGAAGGCTGTCACGGAACCCCACACATGCTGGAAGAGCCTCTACCGTACCCGCCACTTG
CTAGCTCAACAGTGGGGAACTACAAAACACGCACAGACACACACGCTTGTGGGCCATCAA
GACTCAGTCTACTGCTGCCAGTTTGATAACGACAAAATCGTCACCGGCTCGCGGGATAAG
ACCATTCGAGTGTGGAACGCAACTACTTATGTCTGTGAACGTGTATTGGCTGGCCACGAA
GCGTCGGTCTTGTGTCTCCAGTTTGACGAAAAAATCATGGTGTCAGGCTCGTCCGATTAC
TCCATCATCATCTGGGATATGGTGTCTATGCAGCCTATTCGTCGAGTCATAACACACACC
TCCCGCGTGCTTTCAGTGTGTCTCTCCCCGGAGTACATTTTCTCGTGCTCCAAGGACGGC
ACCATCTGTGTTACGAAGCGGTCTGACTTTACGCTCAAGTACCGGCTGTCAGGTCACAAC
GGACCTGTCAACAACATCCAGGTCTTTGGAGACTACATCTACAGCGCAGGGGGCGACGCA
CTCATCAAAAAGTGGTCCCTGGCCACAGGTCTGTGTGTCAGAGACTACCGAGGCCACACA
CGCGGAGCTGCTTGCATAGAAGCCAACGACAAATTGATAGTATCTGGCAGTAGCGACAAT
ACCATCCGTGTGTGGGACAAGGACAGTGGCACATCCAAGGTGCTGGAGGGCCACAGCAAG
CTGGTCAGAAGCATCAACTTATACGACGACTACATTATTTCGTCGTCGTATGACCTGTCT
ATTAAGATTTGGACTATTGAGGGTCGGCTTCTGACGAGTTTGACGGGCTATCATTCTGGC
TCGTTGATCACGGCCAAGGCTGACCGACAGAAGATTGTCTCCACATCTCTGGGCTGTTCT
CCTGTGATTTTCGATTTTGGAGCGGGTCTCAAAGAAGAGCACCTAGCTCAAATCACGGGT
TAGTTAAATAGGGATTGTAGCATATGTATTTATTGGTTGGGC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F21901g_CDS-001

Protein length: 521 aa.
Product: Conserved hypothetical protein

>YALI0F21901g_CDS-001 MPGVASSSSSTFSSTSRFKNARQRLSRLMSRLPSFSSDARDGFRNGFVNINGSVASGWGA
SSSSSSSTPVVKKRDREETATTPPAAPTTKTPKRVSTSPSITSSALSRFSWSESEHRRTL
SSKLFYSPQRVIGETESGIAFIDDVPQGTDFVSILPTEISFSIFALLDPLDLDNCALVSR
DWNRAINSDPLWRQMFYQNRWKAVTEPHTCWKSLYRTRHLLAQQWGTTKHAQTHTLVGHQ
DSVYCCQFDNDKIVTGSRDKTIRVWNATTYVCERVLAGHEASVLCLQFDEKIMVSGSSDY
SIIIWDMVSMQPIRRVITHTSRVLSVCLSPEYIFSCSKDGTICVTKRSDFTLKYRLSGHN
GPVNNIQVFGDYIYSAGGDALIKKWSLATGLCVRDYRGHTRGAACIEANDKLIVSGSSDN
TIRVWDKDSGTSKVLEGHSKLVRSINLYDDYIISSSYDLSIKIWTIEGRLLTSLTGYHSG
SLITAKADRQKIVSTSLGCSPVIFDFGAGLKEEHLAQITG*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG